Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20319
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    27   0.069
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    27   0.069
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   4.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   6.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   6.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   6.0  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 0.069
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 140 MKLKWRSRNIIYGMIILVGKIAIESFNNEK 229
           ++  W+S  ++Y +  L+G   I  F  +K
Sbjct: 46  LRFSWKSARVVYALFTLLGTFLISGFQMQK 75


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 27.5 bits (58), Expect = 0.069
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 140 MKLKWRSRNIIYGMIILVGKIAIESFNNEK 229
           ++  W+S  ++Y +  L+G   I  F  +K
Sbjct: 46  LRFSWKSARVVYALFTLLGTFLISGFQMQK 75


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 289  SLNSIFFNILHMSSLLCPLLFFVIK 215
            S NSI  ++   S   CP+L+FVI+
Sbjct: 1503 SSNSITLHLSAWSDGGCPMLYFVIE 1527


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 137 IMKLKWRSRNIIY 175
           +M LKW  RNI Y
Sbjct: 163 VMALKWVQRNIKY 175


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 137 IMKLKWRSRNIIY 175
           +M LKW  RN+ Y
Sbjct: 161 VMALKWVQRNVKY 173


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 137 IMKLKWRSRNIIY 175
           +M LKW  RN+ Y
Sbjct: 163 VMALKWVQRNVKY 175


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 137 IMKLKWRSRNIIY 175
           +M LKW  RN+ Y
Sbjct: 161 VMALKWVQRNVKY 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,611
Number of Sequences: 336
Number of extensions: 1851
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)