Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20319
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         27   0.46 
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     27   0.46 
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     27   0.46 
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     27   0.46 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   7.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.4  

>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 0.46
 Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 328 WDLFWDNLFWFLHSLN-SIFFNILHMSSLLCP 236
           WD ++ N+ W   ++N  +F  +LH++ +  P
Sbjct: 121 WDTYYKNMIWARDNINEGMFIYVLHLTVMHRP 152


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 0.46
 Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 328 WDLFWDNLFWFLHSLN-SIFFNILHMSSLLCP 236
           WD ++ N+ W   ++N  +F  +LH++ +  P
Sbjct: 121 WDTYYKNMIWARDNINEGMFIYVLHLTVMHRP 152


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 0.46
 Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 328 WDLFWDNLFWFLHSLN-SIFFNILHMSSLLCP 236
           WD ++ N+ W   ++N  +F  +LH++ +  P
Sbjct: 121 WDTYYKNMIWARDNINEGMFIYVLHLTVMHRP 152


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 26.6 bits (56), Expect = 0.46
 Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 328 WDLFWDNLFWFLHSLN-SIFFNILHMSSLLCP 236
           WD ++ N+ W   ++N  +F  +LH++ +  P
Sbjct: 121 WDTYYKNMIWARDNINEGMFIYVLHLTVMHRP 152


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 6/19 (31%), Positives = 15/19 (78%)
 Frame = -3

Query: 139 DKLNSKFFSTIFVQKSLTY 83
           D+LN+ + + +F+Q+++ Y
Sbjct: 476 DRLNAPYMAAMFLQRNIPY 494


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = -3

Query: 388  FLNLLSSTT--SVRYPRSSLFSWDLFWDNLF---WFLHSLNSIFFNILHMSSLLCPLLFF 224
            F+   SS T    ++  SS  +W+   + +    W L + +S+  + + ++S+    LFF
Sbjct: 2822 FMMAASSGTWDPTKFDYSSPGTWNALMNGVATSSWILMNPSSLISSFVSITSVAAKALFF 2881

Query: 223  VIK 215
            V K
Sbjct: 2882 VAK 2884


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,162
Number of Sequences: 2352
Number of extensions: 6274
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)