Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20314
         (412 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   1.9  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   2.5  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   5.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 262  ELXAKITSLNESPSVHGIIVQMPLDSDHXIDAHR 363
            E+   ITSL  S  + G++VQ  L  D   DA R
Sbjct: 1633 EILIFITSLRVSVWLEGVVVQETLLEDVKSDAER 1666


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 390 FIRRDSISDSMSVDRVVRIKGHLNNDAVNGRRFVQTRD 277
           FI  DS+ + M  ++ + I GH+     +    VQT D
Sbjct: 882 FIVIDSMLERMKYEKTIDIYGHVTCLRAHRNYMVQTED 919


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 63  QDL*KMTCVNK*RGCVQNGLASSPGLPS 146
           +++ K+ CV+  R  VQN   S P L S
Sbjct: 385 EEMRKVVCVDNYRPSVQNRWTSDPFLAS 412


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 366,492
Number of Sequences: 2352
Number of extensions: 5371
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)