Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20312
         (617 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6MGL7 Cluster: Glucose inhibited division protein B; n...    32   9.5  
UniRef50_Q8IJG1 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  

>UniRef50_Q6MGL7 Cluster: Glucose inhibited division protein B; n=1;
           Bdellovibrio bacteriovorus|Rep: Glucose inhibited
           division protein B - Bdellovibrio bacteriovorus
          Length = 221

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 19/74 (25%), Positives = 34/74 (45%)
 Frame = -3

Query: 471 IEFSVNRAPQISFVDGI*SSTEVRLSTLSSEKLPDSLMKIRMKQGLLKVSIFK*KYALLT 292
           +EF   +   ++ V G+   + V +   + E  PD  MK  M +GL  +S    K  ++T
Sbjct: 107 VEFDQKKCEFLNHVAGVLKLSNVTVENRTIESFPDGSMKYVMARGLANIS----KSIMMT 162

Query: 291 AVVILNGNIVFSRK 250
             V+  G + +  K
Sbjct: 163 RKVVPKGGVFYHLK 176


>UniRef50_Q8IJG1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 502

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = +2

Query: 329 FNKPCFILIFIKESGNFSDDKVLKRTSVELQIPSTKEI--CGARFTENSMVCAVENDEYK 502
           F K   I I   ES    ++K+L+  S+E +  + K+I  C    ++N  V   EN+EY 
Sbjct: 96  FEKQTNIDIEPTESFEKGEEKILEAISLENKQNNAKDINDCRPHISKNKNV---ENEEYN 152

Query: 503 NNLCKI 520
           NNL K+
Sbjct: 153 NNLKKV 158


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,113,268
Number of Sequences: 1657284
Number of extensions: 10705359
Number of successful extensions: 23518
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23517
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)