Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20311
         (589 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.63 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.63 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.63 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   5.8  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   5.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.7  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 250 IKYFKWQQVDS*CRFENIYKCEQSIHTSTMYLASLWGI 363
           +    WQ V   C F NI  C+   HT+   L +++ +
Sbjct: 236 VTVISWQAV---CTFYNILLCDSVAHTAGELLGAVYSL 270


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 250 IKYFKWQQVDS*CRFENIYKCEQSIHTSTMYLASLWGI 363
           +    WQ V   C F NI  C+   HT+   L +++ +
Sbjct: 236 VTVISWQAV---CTFYNILLCDSVAHTAGELLGAVYSL 270


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 250 IKYFKWQQVDS*CRFENIYKCEQSIHTSTMYLASLWGI 363
           +    WQ V   C F NI  C+   HT+   L +++ +
Sbjct: 556 VTVISWQAV---CTFYNILLCDSVAHTAGELLGAVYSL 590


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 381 SSSYQKEKMTRQKLYCQHHLLLMSVTKLLFLHCRRH 488
           SS Y K     QKLY     L+ ++T++  ++ RR+
Sbjct: 21  SSIYDKPTKLYQKLYPVLMFLIYTITEIYSVYERRY 56


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 171 DLDISQCNYRHMIKC 127
           DL+++ CNY  +++C
Sbjct: 482 DLELNICNYPQVVQC 496


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = +3

Query: 120 HNYTLSYVYSYIEKYQGLFNTLNRIITTIKERRL 221
           H YTLS++ +Y +     F++   ++   + +RL
Sbjct: 131 HRYTLSFIENYCQFLYNCFHSTLLLMILSRYQRL 164


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 517 LIPHFMPLSLAQEIFVYRKNCN 582
           L+PHF  L L  ++ + R   N
Sbjct: 231 LVPHFTSLPLTDQVQLLRAGWN 252


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 529 NVVSVLDECVTTT*CLLQCRNKSFVTDIRRRWC 431
           N +S + EC     C++  +N++     R R C
Sbjct: 34  NNISSISECKNNGECVINKKNRTACKACRLRKC 66


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 129 CSCDSLLLEIQLLQVFS 79
           C+CD+  LEI+  ++++
Sbjct: 777 CTCDAKYLEIKCKRIYN 793


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,805
Number of Sequences: 336
Number of extensions: 2868
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)