Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20311
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring comp... 57 4e-08
BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring comp... 57 4e-08
AJ249677-1|CAB62539.1| 667|Homo sapiens gamma tubulin ring comp... 57 4e-08
BC000966-1|AAH00966.1| 342|Homo sapiens 76P protein protein. 37 0.046
AK001639-1|BAA91802.1| 531|Homo sapiens protein ( Homo sapiens ... 37 0.046
BT009772-1|AAP88774.1| 824|Homo sapiens tubulin, gamma complex ... 31 2.3
BC046634-1|AAH46634.1| 907|Homo sapiens tubulin, gamma complex ... 31 2.3
BC013781-1|AAH13781.1| 824|Homo sapiens TUBGCP3 protein protein. 31 2.3
AL160033-6|CAI14456.1| 824|Homo sapiens tubulin, gamma complex ... 31 2.3
AL160033-5|CAI14455.1| 907|Homo sapiens tubulin, gamma complex ... 31 2.3
AL139384-4|CAI16950.1| 824|Homo sapiens tubulin, gamma complex ... 31 2.3
AL139384-3|CAI16949.1| 907|Homo sapiens tubulin, gamma complex ... 31 2.3
AJ003062-1|CAA05833.1| 824|Homo sapiens protein ( Homo sapiens ... 31 2.3
AJ003061-1|CAA05832.1| 907|Homo sapiens protein ( Homo sapiens ... 31 2.3
AF042378-1|AAC39727.1| 907|Homo sapiens spindle pole body prote... 31 2.3
>BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 57.2 bits (132), Expect = 4e-08
Identities = 22/78 (28%), Positives = 52/78 (66%)
Frame = +3
Query: 21 YGLYTQALSEGITEVLLSYKKTLVEVESLVIGNHNYTLSYVYSYIEKYQGLFNTLNRIIT 200
+G+Y +A G+ VL Y++ L+++E +G+ + ++S+V +++++Q LF ++ ++
Sbjct: 82 HGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHLSISHVNYFLDQFQLLFPSVMVVVE 141
Query: 201 TIKERRLMGCQILSLIHQ 254
IK +++ GCQIL +++
Sbjct: 142 QIKSQKIHGCQILETVYK 159
Score = 37.1 bits (82), Expect = 0.046
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 212 KEINGLSDIEFNSSNILSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
++I+G +E + G + A+ KI + V QL W+L+G L D ++EFFI
Sbjct: 146 QKIHGCQILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFI 205
Query: 392 SK 397
+
Sbjct: 206 KQ 207
>BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 57.2 bits (132), Expect = 4e-08
Identities = 22/78 (28%), Positives = 52/78 (66%)
Frame = +3
Query: 21 YGLYTQALSEGITEVLLSYKKTLVEVESLVIGNHNYTLSYVYSYIEKYQGLFNTLNRIIT 200
+G+Y +A G+ VL Y++ L+++E +G+ + ++S+V +++++Q LF ++ ++
Sbjct: 82 HGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHLSISHVNYFLDQFQLLFPSVMVVVE 141
Query: 201 TIKERRLMGCQILSLIHQ 254
IK +++ GCQIL +++
Sbjct: 142 QIKSQKIHGCQILETVYK 159
Score = 37.1 bits (82), Expect = 0.046
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 212 KEINGLSDIEFNSSNILSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
++I+G +E + G + A+ KI + V QL W+L+G L D ++EFFI
Sbjct: 146 QKIHGCQILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFI 205
Query: 392 SK 397
+
Sbjct: 206 KQ 207
>AJ249677-1|CAB62539.1| 667|Homo sapiens gamma tubulin ring complex
protein protein.
Length = 667
Score = 57.2 bits (132), Expect = 4e-08
Identities = 22/78 (28%), Positives = 52/78 (66%)
Frame = +3
Query: 21 YGLYTQALSEGITEVLLSYKKTLVEVESLVIGNHNYTLSYVYSYIEKYQGLFNTLNRIIT 200
+G+Y +A G+ VL Y++ L+++E +G+ + ++S+V +++++Q LF ++ ++
Sbjct: 82 HGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHLSISHVNYFLDQFQLLFPSVMVVVE 141
Query: 201 TIKERRLMGCQILSLIHQ 254
IK +++ GCQIL +++
Sbjct: 142 QIKSQKIHGCQILETVYK 159
Score = 37.1 bits (82), Expect = 0.046
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 212 KEINGLSDIEFNSSNILSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
++I+G +E + G + A+ KI + V QL W+L+G L D ++EFFI
Sbjct: 146 QKIHGCQILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFI 205
Query: 392 SK 397
+
Sbjct: 206 KQ 207
>BC000966-1|AAH00966.1| 342|Homo sapiens 76P protein protein.
Length = 342
Score = 37.1 bits (82), Expect = 0.046
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 212 KEINGLSDIEFNSSNILSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
++I+G +E + G + A+ KI + V QL W+L+G L D ++EFFI
Sbjct: 10 QKIHGCQILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFI 69
Query: 392 SK 397
+
Sbjct: 70 KQ 71
>AK001639-1|BAA91802.1| 531|Homo sapiens protein ( Homo sapiens
cDNA FLJ10777 fis, clone NT2RP4000355. ).
Length = 531
Score = 37.1 bits (82), Expect = 0.046
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 212 KEINGLSDIEFNSSNILSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
++I+G +E + G + A+ KI + V QL W+L+G L D ++EFFI
Sbjct: 10 QKIHGCQILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFI 69
Query: 392 SK 397
+
Sbjct: 70 KQ 71
>BT009772-1|AAP88774.1| 824|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 824
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
>BC046634-1|AAH46634.1| 907|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 907
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
>BC013781-1|AAH13781.1| 824|Homo sapiens TUBGCP3 protein protein.
Length = 824
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
>AL160033-6|CAI14456.1| 824|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 824
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
>AL160033-5|CAI14455.1| 907|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 907
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
>AL139384-4|CAI16950.1| 824|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 824
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
>AL139384-3|CAI16949.1| 907|Homo sapiens tubulin, gamma complex
associated protein 3 protein.
Length = 907
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
>AJ003062-1|CAA05833.1| 824|Homo sapiens protein ( Homo sapiens
mRNA for protein encoded by Saccharomyces cerevisiae
SPC98 homologue. ).
Length = 824
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
>AJ003061-1|CAA05832.1| 907|Homo sapiens protein ( Homo sapiens
mRNA for protein encoded by Saccharomyces cerevisiae
SPC98 homologue. ).
Length = 907
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
>AF042378-1|AAC39727.1| 907|Homo sapiens spindle pole body protein
spc98 homolog GCP3 protein.
Length = 907
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFIS 394
+G+ + V I + V+ + L W+ GEL+D Y EFF++
Sbjct: 406 TGDPYMRSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVA 449
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,594,812
Number of Sequences: 237096
Number of extensions: 1488704
Number of successful extensions: 2273
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2273
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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