Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20311
(589 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ249678-1|CAB62508.1| 650|Drosophila melanogaster gamma tubuli... 45 7e-05
AE014134-1901|AAF52962.2| 650|Drosophila melanogaster CG6176-PA... 45 7e-05
AY069292-1|AAL39437.1| 917|Drosophila melanogaster GM14553p pro... 36 0.041
AE014298-1951|AAF48309.1| 917|Drosophila melanogaster CG10988-P... 36 0.041
AF118380-1|AAD27817.1| 917|Drosophila melanogaster gamma-tubuli... 35 0.071
AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p pro... 31 1.2
AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubuli... 31 1.2
AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA... 31 1.2
BT021450-1|AAX33598.1| 728|Drosophila melanogaster AT31458p pro... 28 8.2
BT021313-1|AAX33461.1| 833|Drosophila melanogaster RE12810p pro... 28 8.2
AY061148-1|AAL28696.1| 533|Drosophila melanogaster LD12257p pro... 28 8.2
AF118379-1|AAD27816.1| 819|Drosophila melanogaster gamma-tubuli... 28 8.2
AE014298-2870|AAF48971.2| 852|Drosophila melanogaster CG3917-PB... 28 8.2
AE014298-2869|AAN09502.1| 819|Drosophila melanogaster CG3917-PC... 28 8.2
AE014298-2868|AAN09501.1| 926|Drosophila melanogaster CG3917-PA... 28 8.2
AE014296-1293|AAF50536.2| 728|Drosophila melanogaster CG7716-PA... 28 8.2
>AJ249678-1|CAB62508.1| 650|Drosophila melanogaster gamma tubulin
ring complex protein protein.
Length = 650
Score = 45.2 bits (102), Expect = 7e-05
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = +3
Query: 21 YGLYTQALSEGITEVLLSYKKTLVEVESLVIGNHNYTLSYVYSYIEKYQGLFNTLNRIIT 200
+G Y L++GI L Y + +E +GN +LSYVY+ + L + +IT
Sbjct: 75 HGYYLLNLAKGIEMALEEYYAEIGRLEKYCLGNERNSLSYVYNALYAKFPLLVFMRNLIT 134
Query: 201 TIKERRLMGCQILSLIHQ 254
I L GC +L +HQ
Sbjct: 135 EIHVLNLRGCVLLHNLHQ 152
Score = 38.3 bits (85), Expect = 0.008
Identities = 27/108 (25%), Positives = 39/108 (36%)
Frame = +2
Query: 266 GNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFISKRKDDXXXXXXXXXXXX 445
G+ + A+ I V F L WLL+G + DV+ EFFI D
Sbjct: 157 GDIQLEKAIKIIMKPVKNAFFSSLAHWLLFGVIDDVHSEFFIKFTPTDAVDGSSFSKSA- 215
Query: 446 NVCDKTLVSTLQETLGCGYTLIQXXXXXXXXXXXXKKFLFIGKTVILF 589
C E Y + +K LF+G+TV++F
Sbjct: 216 -TCSLLSAEKNPEDYIWQYEVNMSQLPGFFSIVLAEKVLFVGQTVLVF 262
>AE014134-1901|AAF52962.2| 650|Drosophila melanogaster CG6176-PA
protein.
Length = 650
Score = 45.2 bits (102), Expect = 7e-05
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = +3
Query: 21 YGLYTQALSEGITEVLLSYKKTLVEVESLVIGNHNYTLSYVYSYIEKYQGLFNTLNRIIT 200
+G Y L++GI L Y + +E +GN +LSYVY+ + L + +IT
Sbjct: 75 HGYYLLNLAKGIEMALEEYYAEIGRLEKYCLGNERNSLSYVYNALYAKFPLLVFMRNLIT 134
Query: 201 TIKERRLMGCQILSLIHQ 254
I L GC +L +HQ
Sbjct: 135 EIHVLNLRGCVLLHNLHQ 152
Score = 38.3 bits (85), Expect = 0.008
Identities = 27/108 (25%), Positives = 39/108 (36%)
Frame = +2
Query: 266 GNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFISKRKDDXXXXXXXXXXXX 445
G+ + A+ I V F L WLL+G + DV+ EFFI D
Sbjct: 157 GDIQLEKAIKIIMKPVKNAFFSSLAHWLLFGVIDDVHSEFFIKFTPTDAVDGSSFSKSA- 215
Query: 446 NVCDKTLVSTLQETLGCGYTLIQXXXXXXXXXXXXKKFLFIGKTVILF 589
C E Y + +K LF+G+TV++F
Sbjct: 216 -TCSLLSAEKNPEDYIWQYEVNMSQLPGFFSIVLAEKVLFVGQTVLVF 262
>AY069292-1|AAL39437.1| 917|Drosophila melanogaster GM14553p
protein.
Length = 917
Score = 35.9 bits (79), Expect = 0.041
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFISKRKD 406
+GN ++ V + T++ + + W+L G + D+++EFF+ KD
Sbjct: 401 NGNDMVNKLVEDLLTAICGPLVRMISKWILEGGISDMHREFFVKSIKD 448
>AE014298-1951|AAF48309.1| 917|Drosophila melanogaster CG10988-PA
protein.
Length = 917
Score = 35.9 bits (79), Expect = 0.041
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFISKRKD 406
+GN ++ V + T++ + + W+L G + D+++EFF+ KD
Sbjct: 401 NGNDMVNKLVEDLLTAICGPLVRMISKWILEGGISDMHREFFVKSIKD 448
>AF118380-1|AAD27817.1| 917|Drosophila melanogaster gamma-tubulin
ring protein Dgrip91 protein.
Length = 917
Score = 35.1 bits (77), Expect = 0.071
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 263 SGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFISKRKD 406
+GN ++ V T++ + + W+L G + D+++EFF+ KD
Sbjct: 401 NGNDMVNKLVEDFLTAICGPLVRMISKWILEGGISDMHREFFVKSIKD 448
>AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p
protein.
Length = 1351
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 266 GNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFISK 397
GNK ++ +++ + QL W+ +GEL + E FIS+
Sbjct: 417 GNKDFLHLLIYFLRCISRNYFIQLQRWIYHGELDESVNEIFISR 460
>AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubulin
ring protein protein.
Length = 1351
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 266 GNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFISK 397
GNK ++ +++ + QL W+ +GEL + E FIS+
Sbjct: 417 GNKDFLHLLIYFLRCISRNYFIQLQRWIYHGELDESVNEIFISR 460
>AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA
protein.
Length = 1351
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 266 GNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFISK 397
GNK ++ +++ + QL W+ +GEL + E FIS+
Sbjct: 417 GNKDFLHLLIYFLRCISRNYFIQLQRWIYHGELDESVNEIFISR 460
>BT021450-1|AAX33598.1| 728|Drosophila melanogaster AT31458p
protein.
Length = 728
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 278 IHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
+ + V KI TS ++ ++ + W+ G L D EFF+
Sbjct: 259 LKERVNKILTSTSRAYMKIVQLWMQKGVLFDTQHEFFV 296
>BT021313-1|AAX33461.1| 833|Drosophila melanogaster RE12810p
protein.
Length = 833
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 260 LSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
L GNK ++ + K ++ L W+ G + D ++EF +
Sbjct: 428 LEGNKDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLV 471
>AY061148-1|AAL28696.1| 533|Drosophila melanogaster LD12257p
protein.
Length = 533
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 260 LSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
L GNK ++ + K ++ L W+ G + D ++EF +
Sbjct: 35 LEGNKDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLV 78
>AF118379-1|AAD27816.1| 819|Drosophila melanogaster gamma-tubulin
ring protein Dgrip84 protein.
Length = 819
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 260 LSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
L GNK ++ + K ++ L W+ G + D ++EF +
Sbjct: 354 LEGNKDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLV 397
>AE014298-2870|AAF48971.2| 852|Drosophila melanogaster CG3917-PB,
isoform B protein.
Length = 852
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 260 LSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
L GNK ++ + K ++ L W+ G + D ++EF +
Sbjct: 354 LEGNKDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLV 397
>AE014298-2869|AAN09502.1| 819|Drosophila melanogaster CG3917-PC,
isoform C protein.
Length = 819
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 260 LSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
L GNK ++ + K ++ L W+ G + D ++EF +
Sbjct: 354 LEGNKDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLV 397
>AE014298-2868|AAN09501.1| 926|Drosophila melanogaster CG3917-PA,
isoform A protein.
Length = 926
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 260 LSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
L GNK ++ + K ++ L W+ G + D ++EF +
Sbjct: 428 LEGNKDAQQLIIGLVRKAAKPYMRMLQMWIQKGVIVDRHREFLV 471
>AE014296-1293|AAF50536.2| 728|Drosophila melanogaster CG7716-PA
protein.
Length = 728
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 278 IHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 391
+ + V KI TS ++ ++ + W+ G L D EFF+
Sbjct: 259 LKERVNKILTSTSRAYMKIVQLWMQKGVLFDTQHEFFV 296
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,392,595
Number of Sequences: 53049
Number of extensions: 461438
Number of successful extensions: 1231
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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