Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20309
         (727 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98883-1|CAB56148.2|  581|Homo sapiens phosphatidylinositol glyc...    31   4.2  
AF030177-1|AAC32661.1|  581|Homo sapiens N-acetylglucosaminyl tr...    31   4.2  
AE006464-3|AAK61235.1|  581|Homo sapiens N-acetylglucosamyl tran...    31   4.2  
AB003723-1|BAA24948.1|  581|Homo sapiens GPI1 protein.                 31   4.2  
BC027482-1|AAH27482.1|  183|Homo sapiens Ras homolog enriched in...    31   5.6  
AY509932-1|AAS80166.1|  181|Homo sapiens RHEBL1c protein.              31   5.6  
AY327412-1|AAP92804.1|  183|Homo sapiens Ras homolog enriched in...    31   5.6  
AK098663-1|BAC05370.1|  183|Homo sapiens protein ( Homo sapiens ...    31   5.6  

>Z98883-1|CAB56148.2|  581|Homo sapiens phosphatidylinositol glycan
           anchor biosynthesis, class Q protein.
          Length = 581

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 631 LPYSRPYHTIYRLPRLGMPSQYVWG 557
           LPYSR  HT YRLP  G   ++ WG
Sbjct: 535 LPYSRVVHT-YRLPSCGCHPKHSWG 558


>AF030177-1|AAC32661.1|  581|Homo sapiens N-acetylglucosaminyl
           transferase component Gpi1 protein.
          Length = 581

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 631 LPYSRPYHTIYRLPRLGMPSQYVWG 557
           LPYSR  HT YRLP  G   ++ WG
Sbjct: 535 LPYSRVVHT-YRLPSCGCHPKHSWG 558


>AE006464-3|AAK61235.1|  581|Homo sapiens N-acetylglucosamyl
           transferase component GPI1 protein.
          Length = 581

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 631 LPYSRPYHTIYRLPRLGMPSQYVWG 557
           LPYSR  HT YRLP  G   ++ WG
Sbjct: 535 LPYSRVVHT-YRLPSCGCHPKHSWG 558


>AB003723-1|BAA24948.1|  581|Homo sapiens GPI1 protein.
          Length = 581

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 631 LPYSRPYHTIYRLPRLGMPSQYVWG 557
           LPYSR  HT YRLP  G   ++ WG
Sbjct: 535 LPYSRVVHT-YRLPSCGCHPKHSWG 558


>BC027482-1|AAH27482.1|  183|Homo sapiens Ras homolog enriched in
           brain like 1 protein.
          Length = 183

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 18  SLYRLSHTAPGPARLATLLIRNETRLA*RSRYQAIKSKKKSETF 149
           SLY+  H   G  R+  +L+ N+  L+     QA++ KK +E++
Sbjct: 98  SLYQKLHEGHGKTRVPVVLVGNKADLSPEREVQAVEGKKLAESW 141


>AY509932-1|AAS80166.1|  181|Homo sapiens RHEBL1c protein.
          Length = 181

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 18  SLYRLSHTAPGPARLATLLIRNETRLA*RSRYQAIKSKKKSETF 149
           SLY+  H   G  R+  +L+ N+  L+     QA++ KK +E++
Sbjct: 96  SLYQKLHEGHGKTRVPVVLVGNKADLSPEREVQAVEGKKLAESW 139


>AY327412-1|AAP92804.1|  183|Homo sapiens Ras homolog enriched in
           brain-like 1 protein.
          Length = 183

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 18  SLYRLSHTAPGPARLATLLIRNETRLA*RSRYQAIKSKKKSETF 149
           SLY+  H   G  R+  +L+ N+  L+     QA++ KK +E++
Sbjct: 98  SLYQKLHEGHGKTRVPVVLVGNKADLSPEREVQAVEGKKLAESW 141


>AK098663-1|BAC05370.1|  183|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25797 fis, clone TST07046. ).
          Length = 183

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +3

Query: 18  SLYRLSHTAPGPARLATLLIRNETRLA*RSRYQAIKSKKKSETF 149
           SLY+  H   G  R+  +L+ N+  L+     QA++ KK +E++
Sbjct: 98  SLYQKLHEGHGKTRVPVVLVGNKADLSPEREVQAVEGKKLAESW 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,851,817
Number of Sequences: 237096
Number of extensions: 2546541
Number of successful extensions: 4754
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4754
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)