Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20302
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   4.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   4.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   4.0  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   6.9  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   6.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   9.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   9.2  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 85  WTSARVRICGARVVGSTVVNII 20
           W SARV      ++G+T V ++
Sbjct: 67  WASARVGYTIVTILGATFVTVL 88


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 85  WTSARVRICGARVVGSTVVNII 20
           W SARV      ++G+T V ++
Sbjct: 67  WASARVGYTIVTILGATFVTVL 88


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 85  WTSARVRICGARVVGSTVVNII 20
           W SARV      ++G+T V ++
Sbjct: 67  WASARVGYTIVTILGATFVTVL 88


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 171 FDLNYLQCLLNQ 206
           FD NYLQCLL +
Sbjct: 40  FD-NYLQCLLKK 50


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 171 FDLNYLQCLLNQ 206
           FD NYLQCLL +
Sbjct: 40  FD-NYLQCLLKK 50


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 93  ISRKF*ILTNYLQYIL 140
           I R+F IL NYL  +L
Sbjct: 179 IWRRFTILNNYLTIVL 194


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 93  ISRKF*ILTNYLQYIL 140
           I R+F IL NYL  +L
Sbjct: 175 IWRRFTILNNYLTIVL 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,330
Number of Sequences: 336
Number of extensions: 2208
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)