Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20302
         (444 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2962|AAF53692.2|  417|Drosophila melanogaster CG10338-P...    57   9e-09
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P...    29   3.8  
AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p pro...    27   8.7  
AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA...    27   8.7  

>AE014134-2962|AAF53692.2|  417|Drosophila melanogaster CG10338-PA
           protein.
          Length = 417

 Score = 57.2 bits (132), Expect = 9e-09
 Identities = 24/33 (72%), Positives = 25/33 (75%)
 Frame = +1

Query: 340 VFLPKGYPDRAXRDXSAYQIWDTDXAFCSTITG 438
           VFLPKGYPD    D +AYQIWDT  AFCSTI G
Sbjct: 52  VFLPKGYPDSVSEDYAAYQIWDTAQAFCSTICG 84


>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
            protein.
          Length = 4899

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +2

Query: 224  KEKYGSSSTEPFT*NHPSKLWLXCMMKQRSITS-GTGSRMFFYQKDILTG 370
            +E    S   P + +HPSKL   C  K   I + GTG       KD L G
Sbjct: 2001 REDVSGSEASPTSDSHPSKLLRHCAAKLLQILAVGTGLHGAQLDKDALRG 2050


>AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p
           protein.
          Length = 1486

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 74  SGSDMRGSGCREYRSQYYYVG 12
           SG D+ GSG   + + YYY G
Sbjct: 891 SGDDLTGSGVAVFENDYYYEG 911


>AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA
           protein.
          Length = 1486

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 74  SGSDMRGSGCREYRSQYYYVG 12
           SG D+ GSG   + + YYY G
Sbjct: 891 SGDDLTGSGVAVFENDYYYEG 911


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,272,480
Number of Sequences: 53049
Number of extensions: 365122
Number of successful extensions: 626
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)