Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20300
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-P...    29   6.0  
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P...    29   6.0  
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    29   6.0  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    29   6.0  

>AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-PE,
            isoform E protein.
          Length = 2403

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 244  RSYRIVPIAHETKPTRPYG*EDPRKAGERGS 152
            R+ RI P   E +P RP G E+P  AGE G+
Sbjct: 1440 RAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469


>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
            isoform D protein.
          Length = 7210

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 244  RSYRIVPIAHETKPTRPYG*EDPRKAGERGS 152
            R+ RI P   E +P RP G E+P  AGE G+
Sbjct: 6247 RAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
            isoform C protein.
          Length = 4463

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 244  RSYRIVPIAHETKPTRPYG*EDPRKAGERGS 152
            R+ RI P   E +P RP G E+P  AGE G+
Sbjct: 1440 RAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 244  RSYRIVPIAHETKPTRPYG*EDPRKAGERGS 152
            R+ RI P   E +P RP G E+P  AGE G+
Sbjct: 6247 RAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,350,745
Number of Sequences: 53049
Number of extensions: 680282
Number of successful extensions: 2059
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2054
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)