Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20298
         (560 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09324-1|CAA70505.1|  553|Homo sapiens UDP-GalNAc:polypeptide N-...    29   8.5  
BC010659-1|AAH10659.1|  552|Homo sapiens UDP-N-acetyl-alpha-D-ga...    29   8.5  
BC006269-1|AAH06269.2|  288|Homo sapiens GALNT14 protein protein.      29   8.5  
AY358758-1|AAQ89118.1|  552|Homo sapiens RRLT2434 protein.             29   8.5  
AK091313-1|BAC03634.1|  552|Homo sapiens protein ( Homo sapiens ...    29   8.5  
AK024039-1|BAB14795.1|  457|Homo sapiens protein ( Homo sapiens ...    29   8.5  
AK022753-1|BAB14227.1|  557|Homo sapiens e (T2).  protein.             29   8.5  
AC009301-1|AAX88899.1|  452|Homo sapiens unknown protein.              29   8.5  
AB078144-1|BAC56889.1|  552|Homo sapiens UDP-N-acetyl-alpha-D-ga...    29   8.5  

>Y09324-1|CAA70505.1|  553|Homo sapiens UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase protein.
          Length = 553

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 436 DNYE*SYRIYLIRLKLKIVCCNG*LQIIAQYHIYIFP 326
           +N+E S+R+++    L+IV C+    +  + H Y+FP
Sbjct: 310 ENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFP 346


>BC010659-1|AAH10659.1|  552|Homo sapiens
           UDP-N-acetyl-alpha-D-galactosamine:polypeptide
           N-acetylgalactosaminyltransferas protein.
          Length = 552

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 436 DNYE*SYRIYLIRLKLKIVCCNG*LQIIAQYHIYIFP 326
           +N+E S+R+++    L+IV C+    +  + H Y+FP
Sbjct: 308 ENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFP 344


>BC006269-1|AAH06269.2|  288|Homo sapiens GALNT14 protein protein.
          Length = 288

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 436 DNYE*SYRIYLIRLKLKIVCCNG*LQIIAQYHIYIFP 326
           +N+E S+R+++    L+IV C+    +  + H Y+FP
Sbjct: 44  ENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFP 80


>AY358758-1|AAQ89118.1|  552|Homo sapiens RRLT2434 protein.
          Length = 552

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 436 DNYE*SYRIYLIRLKLKIVCCNG*LQIIAQYHIYIFP 326
           +N+E S+R+++    L+IV C+    +  + H Y+FP
Sbjct: 308 ENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFP 344


>AK091313-1|BAC03634.1|  552|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33994 fis, clone DFNES2008088, weakly similar to
           POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE (EC
           2.4.1.41). ).
          Length = 552

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 436 DNYE*SYRIYLIRLKLKIVCCNG*LQIIAQYHIYIFP 326
           +N+E S+R+++    L+IV C+    +  + H Y+FP
Sbjct: 308 ENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFP 344


>AK024039-1|BAB14795.1|  457|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13977 fis, clone Y79AA1001603, weakly similar to
           POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE (EC
           2.4.1.41). ).
          Length = 457

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 436 DNYE*SYRIYLIRLKLKIVCCNG*LQIIAQYHIYIFP 326
           +N+E S+R+++    L+IV C+    +  + H Y+FP
Sbjct: 275 ENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFP 311


>AK022753-1|BAB14227.1|  557|Homo sapiens e (T2).  protein.
          Length = 557

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 436 DNYE*SYRIYLIRLKLKIVCCNG*LQIIAQYHIYIFP 326
           +N+E S+R+++    L+IV C+    +  + H Y+FP
Sbjct: 313 ENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFP 349


>AC009301-1|AAX88899.1|  452|Homo sapiens unknown protein.
          Length = 452

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 436 DNYE*SYRIYLIRLKLKIVCCNG*LQIIAQYHIYIFP 326
           +N+E S+R+++    L+IV C+    +  + H Y+FP
Sbjct: 208 ENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFP 244


>AB078144-1|BAC56889.1|  552|Homo sapiens
           UDP-N-acetyl-alpha-D-galactosamine:polypeptide
           N-acetylgalactosaminyltransferas protein.
          Length = 552

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 436 DNYE*SYRIYLIRLKLKIVCCNG*LQIIAQYHIYIFP 326
           +N+E S+R+++    L+IV C+    +  + H Y+FP
Sbjct: 308 ENFEISFRVWMCGGSLEIVPCSRVGHVFRKKHPYVFP 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,893,271
Number of Sequences: 237096
Number of extensions: 1208666
Number of successful extensions: 1427
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)