Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20297
(534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 1.3
06_03_1132 - 27883151-27883777 30 1.3
02_05_0599 - 30251708-30251815,30251864-30251984,30252068-302522... 29 1.8
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 29 2.4
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 2.4
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 28 4.1
03_05_0999 - 29583959-29584711,29584797-29585021,29585163-295853... 28 4.1
02_04_0650 + 24728700-24728725,24729582-24729660,24729802-247298... 28 4.1
12_01_0072 + 609254-609722,610355-610421,610652-610745,610984-61... 28 5.4
11_01_0071 + 565349-565814,566626-566692,567255-567288,567747-56... 28 5.4
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 5.4
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 28 5.4
10_08_0190 + 15607241-15607409,15607932-15607990,15608883-156089... 27 7.2
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 27 7.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 27 7.2
09_04_0436 - 17558603-17559265,17559322-17559384 27 7.2
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 27 7.2
04_04_0208 - 23605701-23607149 27 7.2
03_04_0013 + 16436438-16436536,16437257-16437742,16437791-164378... 27 7.2
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167... 27 9.5
08_02_0604 - 19215017-19215101,19215870-19216021,19216591-192166... 27 9.5
05_06_0025 + 25018426-25018596,25018692-25018892,25018983-250192... 27 9.5
04_04_1085 - 30719921-30719960,30720206-30720351,30720469-307205... 27 9.5
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 97 DLKSQLEGFNTSCLRDVDTNEKIVL 171
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>06_03_1132 - 27883151-27883777
Length = 208
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/84 (30%), Positives = 36/84 (42%)
Frame = +3
Query: 75 RPPQGRHRPEESARRLQHQLSP*RRHQ*KDCASVC*RRRH*EDPEVFIRRYREV*FEPAE 254
RPP R S RR +H L P D A+ R R V R V +EP+
Sbjct: 120 RPPPPRASRSGSRRRHRHSLLPRASRARGDVAAAASRAR----GAVVAATSRLVRWEPSG 175
Query: 255 HTETQEKNPLPDKDAIEAEKEKNK 326
H E E NP+ ++ + ++ K K
Sbjct: 176 HREAVE-NPMRERRKRKRKRRKKK 198
>02_05_0599 -
30251708-30251815,30251864-30251984,30252068-30252215,
30252303-30252480,30252587-30252625,30252704-30252799,
30252879-30253030,30253336-30253722,30253836-30253940,
30254083-30254098
Length = 449
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 269 GEEPASGQRRYRSGEGKEQIPERHRELR--SH*AEAHG-NVREELAP 400
GEEPA R+G G P +HRE + SH + +G +R L P
Sbjct: 6 GEEPAHDFLSLRAGGGSSSPPFQHREEQHSSHSSRGYGMEIRRSLRP 52
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 104 RVSSKASTPAVSVTSTPMKRLCFR 175
+VSS++S+P SVT+ ++ +CFR
Sbjct: 72 QVSSQSSSPVESVTTATLRPICFR 95
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 59 TLPP*KTSPRSPQT*RVSSKASTPAVSVTST 151
TLPP + SP SP T SSK TP+ S S+
Sbjct: 31 TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSS 61
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 261 ETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVI 416
+T + PLP D+IEA + + + +E KL ++ E S D +
Sbjct: 806 QTLDTTPLPGSDSIEANRRRERGQRALEQRLAEKLAAVKSSEGTSQDASDKV 857
>03_05_0999 -
29583959-29584711,29584797-29585021,29585163-29585360,
29585472-29586056
Length = 586
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 119 ASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIRAS*THRDSGEEPASGQRR 298
+S+ + + TST +R F L + +PR L + SR L+R S + E+ A
Sbjct: 14 SSSSSNTATSTSSRR-SFSLFSKNQYCKPRPLRRSSSRLLVRCS-LQQQQEEKAAPAAES 71
Query: 299 YRSGEGKE 322
+ +G G++
Sbjct: 72 HHAGGGQD 79
>02_04_0650 +
24728700-24728725,24729582-24729660,24729802-24729889,
24730216-24730297,24731083-24731278,24731432-24731816,
24733332-24734428,24734621-24734886,24735565-24735631,
24735722-24735772,24736033-24736123,24736239-24736345
Length = 844
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -3
Query: 505 YINIKIRRY*RDTFASNCYKVVVQADFSCSMTSFVGSEF 389
Y+NI + R D S+C++ + C+ + G EF
Sbjct: 520 YVNISLARIGDDNCCSDCFRDCLAQSLPCACAAETGGEF 558
>12_01_0072 +
609254-609722,610355-610421,610652-610745,610984-611127
Length = 257
Score = 27.9 bits (59), Expect = 5.4
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 44 PAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPL-RRPRSLYS 220
PA T PP RSP+ R S A+ P VT+ L T+P+ RPR L S
Sbjct: 3 PAAATTTPPPSERHRSPKVKRQRSAAAQPLGDVTN-----LLLPSTPTNPITARPRPLPS 57
Query: 221 --TVSRSLIRAS*TH 259
T + S AS +H
Sbjct: 58 DTTAAASTCSASPSH 72
>11_01_0071 +
565349-565814,566626-566692,567255-567288,567747-567860
Length = 226
Score = 27.9 bits (59), Expect = 5.4
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +2
Query: 44 PAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLR-RPRSLYS 220
PA T PP RSP+ R S A+ P VT+ L T+P RPR L S
Sbjct: 3 PAAATTTPPPSERHRSPKVKRQRSAAAQPLGDVTN-----LLLPSTPTNPTTGRPRPLPS 57
Query: 221 --TVSRSLIRAS*THRD-SGEEPASGQ 292
T + S AS +H S ASG+
Sbjct: 58 DTTAAASTCSASPSHTPVSKPSSASGE 84
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 73 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 165
K+L + DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 73 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 165
K+L + DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>10_08_0190 +
15607241-15607409,15607932-15607990,15608883-15608991,
15609394-15609551,15609976-15610044,15610158-15610847,
15611112-15611629,15611725-15611789,15613010-15613089,
15613894-15613998,15614768-15614881,15615029-15615168,
15615257-15615385,15615903-15616055,15616186-15616327
Length = 899
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -2
Query: 227 IPSNKDFWVFSVATSSADGSTIFSLVSTSRRQLVL 123
+PSN+ + ++ TSS++GS FSL +++ + L
Sbjct: 500 LPSNESWDYYASRTSSSNGSVYFSLQNSTNSDMDL 534
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 293 RRY-RSGEGKEQIPERHRELRSH*AEAHGNVREELAPHKGRH*AREISLNHYFITVTRKC 469
RR+ GE +P ++ E E H + + H + LNH+ + R
Sbjct: 1746 RRFSEQGEHARSVPSKNLEECEPSLENHSTGKTSIEDISMEHRKLAVDLNHFHQELERLK 1805
Query: 470 ISLVSPYFNIDVSKID 517
+SP +D++ ID
Sbjct: 1806 NENLSPLLPLDINLID 1821
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 8 PLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKR 163
P P I +++PAP PP ++S R+P SSK P P R
Sbjct: 651 PPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANR 702
>09_04_0436 - 17558603-17559265,17559322-17559384
Length = 241
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 68 P*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIR- 244
P + + SP T +S ++TP + ++TP L +R R P S S R+
Sbjct: 154 PLRLASASPST---TSSSATPPPNASATPTPSLSWRTTPPPCQRHPSSRASRAVRTTPPC 210
Query: 245 AS*THRDSGEEPASGQRRYRSGEGK 319
S + + +G+RR + GE K
Sbjct: 211 CSSLAENIAQGKKTGERRKKMGEKK 235
>09_04_0151 -
15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 312 KEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQEKS 431
KEK ++ TKLK TE KNS+ K +E EK+
Sbjct: 821 KEKESIRKELDR-TKTKLKETENKLKNSIQEKIKLESEKA 859
>04_04_0208 - 23605701-23607149
Length = 482
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 297 RLCPEAGSSPESRCVQLARI 238
R+CP A S P RC LA I
Sbjct: 55 RMCPSAASLPTRRCFDLAAI 74
>03_04_0013 +
16436438-16436536,16437257-16437742,16437791-16437826,
16437835-16438323,16438951-16439622
Length = 593
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 279 PLPDKDAIEAEKEKNKFLNGIENFDPTKLKH 371
P ++ E EKEK K +N + P KLKH
Sbjct: 489 PFTEEKLQELEKEKEKKINDMAKGWPEKLKH 519
>12_01_0222 -
1675077-1675289,1675476-1675553,1675943-1676002,
1676103-1676206,1676321-1676479,1676768-1676894,
1677569-1677736,1677890-1678000,1678090-1678243,
1678409-1678744,1678854-1679038,1679141-1679239,
1679376-1679639,1679776-1679952,1680351-1680644,
1680753-1680920,1681574-1681918,1682002-1682171,
1682272-1682422,1683296-1683365,1683456-1683640,
1683999-1684092,1684195-1684313,1684658-1684717,
1684844-1684930,1685631-1685717,1685905-1686013,
1686105-1686183,1686350-1686437,1686611-1686675,
1687570-1687722,1688514-1688620,1688702-1688784,
1688926-1689016,1689095-1689231,1689612-1689701,
1689795-1689962,1690366-1690560
Length = 1809
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 284 KRVLLLSLGVFSWLESNFSIPSNKDFWVFSVATSSAD 174
K+ +L+SLG SW E +F+ +N +FS++ S +
Sbjct: 762 KQKILISLGHLSWNELSFAHLNNALDLIFSLSRSKVE 798
>08_02_0604 -
19215017-19215101,19215870-19216021,19216591-19216614,
19216656-19216884,19217061-19217177,19219249-19219311,
19219887-19220125
Length = 302
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = -2
Query: 395 RVLLARFRVLQLSGIEVLDAVQEF--VLFLLRFDSVFVRKRVLLLSLGVFSWLESN---- 234
++LL++ + I VL A F V+FLL F +F R + + G F W+ N
Sbjct: 42 QILLSKVSIGGGMLIFVLLAYNSFFAVVFLLPFALIFERGKWRDMDWGAFGWIFLNAFIG 101
Query: 233 FSIPSNKDFWVFSVATSS 180
+S+P + ++ TSS
Sbjct: 102 YSVPMSLYYYGLKDTTSS 119
>05_06_0025 +
25018426-25018596,25018692-25018892,25018983-25019236,
25019468-25019540,25019659-25019715,25020219-25020298,
25020386-25020448,25020678-25020765,25021055-25021156,
25021296-25021369,25021690-25021754,25021933-25022096,
25022179-25022246,25022337-25022397,25022729-25022766,
25023154-25023329,25023747-25023859,25023944-25023955
Length = 619
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = -1
Query: 531 NGRRKSILLTSILKYGDTSEIHLR-VTVIK 445
N R +LLTSIL YG++S+ HLR V ++K
Sbjct: 584 NTRLLILLLTSIL-YGESSKPHLRGVDIVK 612
>04_04_1085 -
30719921-30719960,30720206-30720351,30720469-30720546,
30720649-30720715,30720948-30721090,30721504-30721535,
30721769-30722168,30722540-30722601,30722716-30722892,
30723078-30723201,30723590-30723760
Length = 479
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 CSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVL--PSAEDVATEK 201
C + DT +K PK+ +D+K Q+E + + + + + +V+ + +DV +E+
Sbjct: 355 CDIEDT-LIKSNPKLTSDVKVQVEAEDMAMMLQLKPEDFVVVLDENGKDVTSEQ 407
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,075,620
Number of Sequences: 37544
Number of extensions: 306160
Number of successful extensions: 1021
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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