Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20297
(534 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 60 1e-09
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 36 0.021
SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 30 1.0
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 1.4
SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 30 1.4
SB_23595| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 29 3.2
SB_29288| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 28 4.2
SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) 28 4.2
SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0) 28 4.2
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 28 5.5
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 28 5.5
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 27 7.3
SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41) 27 7.3
SB_45705| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_15442| Best HMM Match : rve (HMM E-Value=0.00084) 27 9.6
SB_6454| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = +3
Query: 252 EHTETQEKNPLPDKDAIEAEKEKNKFLNGIE--NFDPTKLKHTETCEKNSLPTKDVIEQE 425
+H +T+EKN LP + I+ E + ++F + E +F+ +KL+H ET EKN+LPTKD I E
Sbjct: 423 KHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIADE 482
Query: 426 K 428
K
Sbjct: 483 K 483
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 204 PEVFIRRYREV*FEPA--EHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 377
P+ F R FE + +H ET+EKN LP KD I EK F +G+E F KLKH E
Sbjct: 445 PDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVE 503
Query: 378 TCEKNSLPTKDVIEQE 425
T EKN LP I E
Sbjct: 504 TLEKNPLPDAQNIRAE 519
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +3
Query: 252 EHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQEKS 431
+H E QEKNPLP KD I E + + ++ FD +KLKH +T EKN LP I QEK+
Sbjct: 692 KHVEVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQTEEKNPLPDAKTIAQEKA 749
Query: 432 A 434
+
Sbjct: 750 S 750
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/60 (53%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +3
Query: 252 EHTETQEKNPLPDKDAIEAEK--EKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQE 425
+H ET EKNPLPD I AE E + + FD +KLKH ET EK +PTKDVIE E
Sbjct: 500 KHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 54.8 bits (126), Expect = 4e-08
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 252 EHTETQEKNPLPDKDAIEAEKEKNKF--LNGIENFDPTKLKHTETCEKNSLPTKDVIEQE 425
+H ET EKNPLP ++ E ++ + +FD +KLKH E EKN LPTKD I E
Sbjct: 652 KHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTE 711
Query: 426 KS 431
+
Sbjct: 712 ST 713
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +3
Query: 204 PEVFIRRYREV*FEPAE--HTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 377
PEV R F+ ++ H ET+EK +P KD IEAE ++ +++FD +KLKH
Sbjct: 522 PEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVV 579
Query: 378 TCEKNSLPTKDVIEQE 425
T EKN LPT + +E
Sbjct: 580 TQEKNPLPTPQTLHEE 595
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +3
Query: 252 EHTETQEKNPLPDKDAIEAEK-EKNK-FLNGIENFDPTKLKHTETCEKNSLPTKDVIEQE 425
+H TQEKNPLP + E KNK + + +FD TKLKH T EK+ +P+++ I++E
Sbjct: 576 KHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/58 (39%), Positives = 39/58 (67%)
Frame = +3
Query: 252 EHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQE 425
+H TQEK+ +P ++ I+ E ++ +++FD +KLKH ET EKN LP+ V+++E
Sbjct: 616 KHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVLKEE 671
Score = 35.9 bits (79), Expect = 0.021
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 339 IENFDPTKLKHTETCEKNSLPTKDVIEQE 425
+ FD LKH +T EKN+LP+ + I+QE
Sbjct: 414 VAKFDAANLKHVQTKEKNTLPSDETIKQE 442
Score = 34.3 bits (75), Expect = 0.063
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +1
Query: 79 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQ 249
+P+V D +S++ F+TS L+ V+T EK+V+P+ + + E ++ FD S+
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSK 574
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 79 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDSSQ 249
+PK D +S++ F+ + L+ V T EK ++PS ED+ E ++ FD S+
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSK 650
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 35.9 bits (79), Expect = 0.021
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 67 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 222
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K + S F+
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385
>SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1045
Score = 31.1 bits (67), Expect = 0.59
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = +3
Query: 246 PAEHTETQEKNPL---PDKDAIEAEKEK-NKFLN--GIENFDPTKLKHTETCEKNSLPTK 407
PA +TQEK PL DK+ EA + N+ + I N P K K ++CE K
Sbjct: 381 PASRDKTQEKQPLEKTKDKEKEEANRRSYNRMASYESIGNIGPEKSKSAKSCESLKEAVK 440
Query: 408 DV 413
V
Sbjct: 441 KV 442
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 30.7 bits (66), Expect = 0.78
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +2
Query: 137 SVTSTPMKRLCFRLLKTSPLRRPRSLYSTVS-RSLIRAS----*THRDSGEEPASGQRRY 301
SVT T +RL R S L PRS+ T S R+L R S R GEE G+ Y
Sbjct: 438 SVTGTFARRLVSRTTDASSLEDPRSVVVTSSPRTLGRISNGTTSARRVEGEEHVCGE--Y 495
Query: 302 RSGEGKEQIPERH 340
+ KE +P H
Sbjct: 496 KCSLCKEVVPPDH 508
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -1
Query: 204 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGS 61
GLL+GD+F R K N+ I VD T G + FEL + + E+ GS
Sbjct: 74 GLLAGDIFRRPKANILISVDGV-TKG-DKFELPAKASFPVQEMAGLGS 119
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 49 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 195
S SD P+ D A+D+KS + T DV T++ V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666
>SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -1
Query: 204 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 109
GLL+GD+F R K N+ I VD T G + FEL
Sbjct: 51 GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 3 SIPFLIKNILIQNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 131
S+PF N QN ++ +P R PQG H + A+ +QH+
Sbjct: 226 SLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_23595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 276 NPLPDKDAIEAEKEKNK---FLNGIENFDPTKLKHTETCEKNSLPTKDVIEQ 422
N LPD + E+++ K ++G + + K CE NSLP K ++Q
Sbjct: 171 NNLPDSTCTQKERQRLKSERVVHGEAKHEQDQGKCPNNCEGNSLPQKAYVKQ 222
>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
Length = 492
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 199 SQWRRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLWRPW 83
S WRRLQ+ A S + + D +L A+ G W PW
Sbjct: 419 SLWRRLQELNATSLEYRLQPEDPRSIAL-AERLGRWEPW 456
>SB_29288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 255 HTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSL 398
HTE + +P P K I+ E +++ + I+ KH+ +CE+ +
Sbjct: 213 HTENAKSSPDPIKSEIDGEHSEDEKEHKIKVCPLVDKKHSHSCERTHI 260
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 70 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 198
L DL +V +LKS+ EG CL D++ + DV E
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKE 1166
>SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)
Length = 781
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 14 PHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 154
P + + E P P + L P T+ P+ V +ASTP S +P
Sbjct: 517 PRNSFAEYEKPLPTLPLSPTNTTTGRPRLSTVPPEASTPTDSFPKSP 563
>SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0)
Length = 644
Score = 28.3 bits (60), Expect = 4.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 455 VTRKCISLVSPYFNIDVSKIDL 520
+ KC L+SPY ++D+ DL
Sbjct: 13 IAAKCTQLISPYLDLDIKYFDL 34
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 27.9 bits (59), Expect = 5.5
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 68 P*KTSPRS-PQ-T*RVSSKASTPAVSVTSTPMK-RLCFRLLKTSPLRRPRSLYSTVSRSL 238
P TSPR+ P+ + R S +AS S S+P R R K+SP PRS T SR L
Sbjct: 321 PEVTSPRATPRASPRASPRASPRDQSSHSSPRNSRNSSR--KSSPKPSPRSSRPTSSRKL 378
Query: 239 IRAS*THRDSGEEPASGQR 295
R S R S P SGQ+
Sbjct: 379 SRKS--SRKS-SRPTSGQQ 394
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 261 ETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQEKSA 434
+T E++P DK + L+G+ +FD K +H + K IEQ+ ++
Sbjct: 261 KTIEQDPTSDKSYKALRDTTHDLLDGLRDFDQAKEEHAKLIPKYHKIMIKTIEQDPTS 318
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 272 EEPASGQRRYRSGEGKEQIPERHRELRSH*AEAHGNVREE 391
EEP+ + +G KE+ E RE R H + V+EE
Sbjct: 840 EEPSDEEESEEAGREKEEEEEDQREGRDHNDDEESVVKEE 879
>SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41)
Length = 533
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -3
Query: 241 NQTSRYRRIKTSGSSQ-WR 188
N+TS+YRRI+ GS Q WR
Sbjct: 63 NRTSKYRRIRRRGSRQTWR 81
>SB_45705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 449
Score = 27.1 bits (57), Expect = 9.6
Identities = 25/73 (34%), Positives = 32/73 (43%)
Frame = +3
Query: 198 EDPEVFIRRYREV*FEPAEHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 377
E +V RRY E TQ N + D+ IEAE+ KNK PT T
Sbjct: 82 ESWDVLARRY----VEDLHAKATQLANNVTDQQWIEAEEAKNKVYEEAVQVIPTGTNVT- 136
Query: 378 TCEKNSLPTKDVI 416
TC +SL ++I
Sbjct: 137 TC--HSLDNANII 147
>SB_15442| Best HMM Match : rve (HMM E-Value=0.00084)
Length = 822
Score = 27.1 bits (57), Expect = 9.6
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Frame = +3
Query: 186 RRH*EDPEVFIRRYRE--V*FEPA-EHTETQEKNPLPDKD----AIEAEKEKNKFLNGIE 344
+ H DP FIR Y E +EPA E + P KD AI EK ++G
Sbjct: 690 KTHKSDPVAFIRGYHEYMTEWEPALEDVYKLMRQPTNIKDPNAVAIAREKADKTVMDGDV 749
Query: 345 NFDPTKLKHTETCEK 389
+ ++ + CEK
Sbjct: 750 GYQISQEQRPTNCEK 764
>SB_6454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 166 VLPSAEDVATEKTQKSLFDGIEKFDSSQ 249
++ A ++ATE+T K + G+E+ D Q
Sbjct: 35 IVAGAAEIATEQTNKIIDKGLERVDEQQ 62
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,950,691
Number of Sequences: 59808
Number of extensions: 341609
Number of successful extensions: 1175
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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