Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20297
         (534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      26   0.91 
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   2.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   3.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   4.9  
AY278446-1|AAP37003.1|  151|Anopheles gambiae microsomal glutath...    23   4.9  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.4  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       23   8.5  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.8 bits (54), Expect = 0.91
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 366 KHTETCEKNSLPTKDVIEQEKS 431
           K+T TCE  +LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 178 QTEAQSFHWCRRHGD 134
           QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 179 LKTSPLRRPRSLYSTVSRSLIRAS*THRDSGEEPASGQRRYRSGEGKEQIPER 337
           L  S   R RSL  +VSRS  R S +   + +  +  + R      +  +P R
Sbjct: 413 LSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLPAR 465


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +2

Query: 209  SLYSTVSRSLIRAS*THRDSGEEPASGQRRYRSGEGKEQIPERHRELR 352
            S + TVS     A+     S E P  GQ+  R    K     +H ELR
Sbjct: 903  SCHKTVSNRWHHANIHRPQSHECPVCGQKFTRRDNMKAHCKVKHPELR 950


>AY278446-1|AAP37003.1|  151|Anopheles gambiae microsomal
           glutathione transferase GSTMIC1protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +3

Query: 219 RRYREV*FEPAEHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDP 356
           +R+R+  F   E  +  +K   P  D  + E+ +    N +EN  P
Sbjct: 37  QRFRKKVFANPEDIQPSKKGAQPKFDDPDVERVRRAHRNDLENILP 82


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 380 RFRVLQLSGIEVLDAVQEFVLFLLRFDS 297
           R ++  L  +E+++ +Q+F  F   FD+
Sbjct: 7   RVKMFNLKRVEIMNTLQDFEEFTKSFDA 34


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 263 LGVFSWLESNFSI-PSNKDFWVFSVATSS 180
           + V S ++  F + PSN+  W+F +  SS
Sbjct: 1   MSVTSLVDGEFLLRPSNRACWIFLIFASS 29


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,538
Number of Sequences: 2352
Number of extensions: 10414
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)