Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20296
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18165.1 68416.m02311 expressed protein similar to DAM1 (GI:3... 40 0.001
At5g17320.1 68418.m02029 homeobox-leucine zipper family protein ... 30 1.1
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 30 1.5
At5g38560.1 68418.m04662 protein kinase family protein contains ... 29 2.6
At4g27760.1 68417.m03988 oxidoreductase, forever young (FEY3) id... 29 3.4
At3g51150.1 68416.m05601 kinesin motor family protein contains P... 29 3.4
At5g53100.1 68418.m06597 oxidoreductase, putative similar to for... 28 4.5
At3g26870.1 68416.m03362 self-incompatibility protein-related lo... 28 4.5
At5g53090.1 68418.m06595 oxidoreductase, putative similar to for... 28 6.0
At1g34170.1 68414.m04238 transcriptional factor B3 family protei... 28 6.0
At5g63410.1 68418.m07960 leucine-rich repeat transmembrane prote... 27 7.9
At5g10510.1 68418.m01217 ovule development protein, putative sim... 27 7.9
At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family... 27 7.9
At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family... 27 7.9
At2g31840.1 68415.m03888 expressed protein 27 7.9
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 27 7.9
>At3g18165.1 68416.m02311 expressed protein similar to DAM1
(GI:3985930) [Homo sapiens]; contains Pfam profile
PF05700: Breast carcinoma amplified sequence 2 (BCAS2)
Length = 253
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 268 PEPSSAFET-PALQREMERVQQRLPMEPLSMK-RYELPPPPVGRMSEPSAWAESVDNSHA 441
P P F+ P L +E ERV+ P + + RY+L PP + ++ +AW + + +
Sbjct: 73 PLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAAWKQYLQKNQR 132
Query: 442 QLSHQAIRVLNLEV 483
L + I + NLE+
Sbjct: 133 SLQQKLIELENLEL 146
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 128 AGEVVVDALPYIDQGYDDPGVREAALAMVEEECRR 232
A V+DALPYID Y +P ++ +VEEE RR
Sbjct: 25 ANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRR 59
>At5g17320.1 68418.m02029 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
Roc1 (GI:1907210) [Oryza sativa]; contains Pfam
PF00046: Homeobox domain and Pfam PF01852: START domain
Length = 718
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 253 SENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYE 369
S N PEPSS F P + M P +PL M+ ++
Sbjct: 191 SSNRLPEPSSIFRGPYTRGNMNTTAPPQPRKPLEMQNFQ 229
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 191 REAALAMVEEECRRYRPTKNYLKMQDQNQVLHLKLLLYNERWKECNR 331
REAA +++ R +R KNY K+Q V+ L + R K +R
Sbjct: 782 REAASICIQKNIRAHRARKNYTKLQASATVIQTGLRTMSARNKHRHR 828
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 268 PEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSA 411
P PS ETP+ E + P P PPPP S PS+
Sbjct: 137 PSPSPPGETPSPPGETPSPPKPSPSTPTPTTTTSPPPPPATSASPPSS 184
>At4g27760.1 68417.m03988 oxidoreductase, forever young (FEY3)
identical to forever young (FEY3) oxidoreductase from
GI:12004621 [Arabidopsis thaliana]
Length = 374
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 391 FRLEGVEVHTSS*TMVPSAISVALFPSLVVKQEFQMQNLVLVLH 260
F EG E H + P+ +SV L PSL+ ++ N+ V+H
Sbjct: 159 FSEEGYEQHMQVNHLAPALLSVLLLPSLIRGSPSRIINVNSVMH 202
>At3g51150.1 68416.m05601 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1025
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 292 TPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAWAESVDNSHAQ 444
TP + ER + L +P + KR LP + RMS P+ W E D +H Q
Sbjct: 705 TPPCWYQNERAESNL--KPSNSKRPPLPKH-ISRMSMPATWFEK-DFNHTQ 751
>At5g53100.1 68418.m06597 oxidoreductase, putative similar to
forever young oxidoreductase (FEY3) GI:12004621 from
[Arabidopsis thaliana]
Length = 364
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 391 FRLEGVEVHTSS*TMVPSAISVALFPSLVVKQEFQMQNLVLVLHF 257
F +G E H + P+ +S+ L PSL+ ++ N+ V+H+
Sbjct: 148 FSEDGYEQHMQVNHLAPALLSLLLLPSLIRASRSRIINVNSVMHY 192
>At3g26870.1 68416.m03362 self-incompatibility protein-related low
similarity to self-incompatibility [Papaver nudicaule]
GI:3097262
Length = 130
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -1
Query: 407 LGSLILPTGGGGSSYLFIDNGSIGNLCCTLSISRCKAGVSNAELGSGPAFSDSSLW 240
LG I+P GG + Y F + CTL K G + S AF +S LW
Sbjct: 47 LGPTIIPNGGQFTDYFFHNLFGTTRFMCTL-----KQGPGFSHSQSFRAFKNSGLW 97
>At5g53090.1 68418.m06595 oxidoreductase, putative similar to
forever young oxidoreductase (FEY3) GI:12004621 from
[Arabidopsis thaliana]
Length = 364
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 391 FRLEGVEVHTSS*TMVPSAISVALFPSLVVKQEFQMQNLVLVLHF 257
F +G E H + P+ +S+ L PSL+ ++ N+ V+H+
Sbjct: 147 FSKDGYEQHMQVNHLAPALLSLLLLPSLIRGSPSRIINVNSVMHY 191
>At1g34170.1 68414.m04238 transcriptional factor B3 family protein
contains Pfam profile: PF02362 B3 DNA binding domain;
contains non-consensus GA donor splice site at intron 12
Length = 623
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 451 ETAVHESYPLTRPRHLVHSFFR-LEGVEVHTSS*TMVPSAISVALFPSLVVKQEFQMQNL 275
E H + TR R +V+ F + L +V S ++P ++ FP L + Q QNL
Sbjct: 108 EVMTHNTTMDTR-RPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNL 166
Query: 274 V 272
V
Sbjct: 167 V 167
>At5g63410.1 68418.m07960 leucine-rich repeat transmembrane protein
kinase, putative contains similarity to receptor-like
protein kinase
Length = 680
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 31 IK*TKNSVKTLI*SDKSQYPFVVKGVINFVENGRRSCRRCI 153
+K TKN KT+I + S Y + KG + ENG + RC+
Sbjct: 396 VKATKNFDKTMILGESSLYGTLYKGNL---ENGTKVAIRCL 433
>At5g10510.1 68418.m01217 ovule development protein, putative
similar to ovule development protein aintegumenta
(GI:1209099) [Arabidopsis thaliana]
Length = 566
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 450 SPSYQSSQFRSCS*STVQKQEIIP 521
SP++ S F C S VQ Q+IIP
Sbjct: 471 SPNHSSINFALCPNSAVQSQQIIP 494
>At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family
protein
Length = 438
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/79 (26%), Positives = 29/79 (36%)
Frame = +1
Query: 208 HGGRRVQTL*THKELSENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPV 387
HG RV T + SEN + AL ++ Q P +Y +PPPP
Sbjct: 129 HGEDRVATPVPEPKKSENTSDAHNQQLAL-ALPHQIAPQPQVQPQPQPQQHQYYMPPPPT 187
Query: 388 GRMSEPSAWAESVDNSHAQ 444
+ P+ S S Q
Sbjct: 188 QLQNTPAPVPVSTPPSQLQ 206
>At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family
protein
Length = 496
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/79 (26%), Positives = 29/79 (36%)
Frame = +1
Query: 208 HGGRRVQTL*THKELSENAGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPV 387
HG RV T + SEN + AL ++ Q P +Y +PPPP
Sbjct: 187 HGEDRVATPVPEPKKSENTSDAHNQQLAL-ALPHQIAPQPQVQPQPQPQQHQYYMPPPPT 245
Query: 388 GRMSEPSAWAESVDNSHAQ 444
+ P+ S S Q
Sbjct: 246 QLQNTPAPVPVSTPPSQLQ 264
>At2g31840.1 68415.m03888 expressed protein
Length = 350
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 137 LLLPFSTKFITPFTTNGYCDLSL 69
++LPFST+F P NG+ SL
Sbjct: 1 MILPFSTQFTCPVQDNGFSPSSL 23
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/51 (27%), Positives = 19/51 (37%)
Frame = +1
Query: 262 AGPEPSSAFETPALQREMERVQQRLPMEPLSMKRYELPPPPVGRMSEPSAW 414
+ P P TP ++ P P Y+ PPPPV S P +
Sbjct: 32 SSPPPPVKHYTPPVKHYSPPPVYHSPPPPKKHYEYKSPPPPVKHYSPPPVY 82
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,063,423
Number of Sequences: 28952
Number of extensions: 300754
Number of successful extensions: 983
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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