Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20294
         (406 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55B1C Cluster: PREDICTED: similar to CG4269-PA;...    55   5e-07
UniRef50_Q9W239 Cluster: CG4269-PA; n=2; Sophophora|Rep: CG4269-...    55   6e-07
UniRef50_A0NH17 Cluster: ENSANGP00000030614; n=1; Anopheles gamb...    54   1e-06
UniRef50_Q17NT8 Cluster: Putative uncharacterized protein; n=1; ...    52   3e-06
UniRef50_Q552X9 Cluster: Putative uncharacterized protein; n=2; ...    34   1.2  
UniRef50_Q222V2 Cluster: Putative uncharacterized protein precur...    33   2.9  
UniRef50_Q0HMI9 Cluster: NERD domain protein; n=8; Shewanella|Re...    32   5.0  
UniRef50_A3I4P1 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  

>UniRef50_UPI0000D55B1C Cluster: PREDICTED: similar to CG4269-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG4269-PA - Tribolium castaneum
          Length = 90

 Score = 55.2 bits (127), Expect = 5e-07
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +2

Query: 254 VLDLCQRCAKLTKSKLAYPACCSKDLKARKWCSDYVXFGR 373
           V+++CQRCAK TKS + YP CC  +  A  WC  Y+ +G+
Sbjct: 48  VVEICQRCAKQTKSPIVYPMCCVNEDDAYNWCDQYINYGK 87


>UniRef50_Q9W239 Cluster: CG4269-PA; n=2; Sophophora|Rep: CG4269-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 102

 Score = 54.8 bits (126), Expect = 6e-07
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +2

Query: 257 LDLCQRCAKLTKSKLAYPACCSKDLKARKWCSDYVXFG 370
           ++LC RCAK+TKS+  YP CC  +   + WC +YV FG
Sbjct: 63  MELCMRCAKVTKSEFVYPMCCGNEDGIKDWCREYVYFG 100


>UniRef50_A0NH17 Cluster: ENSANGP00000030614; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030614 - Anopheles gambiae
           str. PEST
          Length = 137

 Score = 53.6 bits (123), Expect = 1e-06
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = +2

Query: 260 DLCQRCAKLTKSKLAYPACCSKDLKARKWCSDYVXFG 370
           +LCQRC+K+TKS L +P CC+ +     WC +YV +G
Sbjct: 98  ELCQRCSKVTKSSLVFPMCCNNEDHTMTWCKEYVYYG 134


>UniRef50_Q17NT8 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 141

 Score = 52.4 bits (120), Expect = 3e-06
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = +2

Query: 254 VLDLCQRCAKLTKSKLAYPACCSKDLKARKWCSDYVXFG 370
           V +LCQRC+K+TKS + +P CCS +     WC  YV +G
Sbjct: 100 VNELCQRCSKVTKSAIVFPMCCSNEDDTMDWCKAYVYYG 138


>UniRef50_Q552X9 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 145

 Score = 33.9 bits (74), Expect = 1.2
 Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +3

Query: 126 NLMFLMALFLCIALVRTATSRPPWLAPGSQIFTESAE-CHTDDECWIYARDAPSLP 290
           + +FL+ LF  +   ++ T+ P W   G+  F ++A+ C +   C I+  ++ ++P
Sbjct: 7   SFLFLVILFSVVLSFQSPTTEPTWADDGTFCFGKTAQTCRSSGACCIWCSNSTAIP 62


>UniRef50_Q222V2 Cluster: Putative uncharacterized protein
           precursor; n=1; Rhodoferax ferrireducens T118|Rep:
           Putative uncharacterized protein precursor - Rhodoferax
           ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
          Length = 663

 Score = 32.7 bits (71), Expect = 2.9
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -1

Query: 208 PGANQGGLEVAVRTSAIQRNSAIKNIKFLHKTNCNAIFSGKRNKNTRESSIINNKXI 38
           PGA    +  AV T+A+Q  +A  N K ++ T  NAI +  +   T   +   N+ +
Sbjct: 418 PGATADSVNTAVVTAAVQAAAAAGNTKVMNMTYINAIAASAQASATTAGTAAGNQYV 474


>UniRef50_Q0HMI9 Cluster: NERD domain protein; n=8; Shewanella|Rep:
           NERD domain protein - Shewanella sp. (strain MR-4)
          Length = 329

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 266 CQRCAKLTKSKLAYPACCSKDLKARKWCSDYVXFGRGCDY 385
           C +C K T  K A P C SK++K +K    Y    + C +
Sbjct: 285 CNQCTKNTPMKQACPQCQSKNIKIQKRNQSYTLTCQDCSH 324


>UniRef50_A3I4P1 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. B14905|Rep: Putative uncharacterized
           protein - Bacillus sp. B14905
          Length = 158

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 150 TAPSKTLSSSIKRTVTPFSQANEIKTHANQV*LIINXFVFVCLVY 16
           TAPSKT S+ +K+ +  F  A        ++  +I  F+F+C+ +
Sbjct: 74  TAPSKTSSTELKKFLIIFGSAIAYVFFLEKIGYVITTFLFLCISF 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,626,659
Number of Sequences: 1657284
Number of extensions: 6785031
Number of successful extensions: 20611
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20605
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)