Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20294
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   0.86 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   1.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   1.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   1.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   4.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   8.0  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 0.86
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 172 GPPPQDRPGWRRAVRSSRSQLNVTQTTSVGFMPE 273
           G P  D P W+   +     +++ +  +VG  PE
Sbjct: 465 GSPNVDEPDWKPISKEEIHFIDIGENITVGVNPE 498


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 172 GPPPQDRPGWRRAVRSSRSQLNVTQTTSVGFMPE 273
           G P  D P W+   +     +++ +  +VG  PE
Sbjct: 463 GSPNVDGPDWKPISKEEIHFIDIGENITVGVNPE 496


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 172 GPPPQDRPGWRRAVRSSRSQLNVTQTTSVGFMPE 273
           G P  D P W+   +     +++ +  +VG  PE
Sbjct: 463 GSPNVDGPDWKPISKEEIHFIDIGENITVGVNPE 496


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 172 GPPPQDRPGWRRAVRSSRSQLNVTQTTSVGFMPE 273
           G P  D P W+   +     +++ +  +VG  PE
Sbjct: 465 GSPNVDGPDWKPISKEEIHFIDIGENITVGVNPE 498


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 172 GPPPQDRPGWRRAVRSSRSQLNV 240
           G PPQ+ P W     +S+   NV
Sbjct: 11  GAPPQEMPTWFVRWLNSQQPRNV 33


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 148 CSFVSHWFGPPPQDRP 195
           C+  S W G PP+  P
Sbjct: 31  CTTASSWPGRPPKRAP 46


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +3

Query: 225  ESAECHTDDECWIYARDAPSLPNQ 296
            E+ ECH D    +     P +P++
Sbjct: 2280 ENTECHPDASSTMAPSTTPMVPDK 2303


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -2

Query: 207 PAPTRAVLRWRSEPVRYKGTAPSKTLSSSIKRTVTP 100
           P PT  +      PV    T+P+  L+ +I     P
Sbjct: 313 PTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPYP 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,782
Number of Sequences: 336
Number of extensions: 1718
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)