Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20294
         (406 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3411|AAF46860.1|  102|Drosophila melanogaster CG4269-PA...    55   4e-08
BT025899-1|ABG02143.1|  770|Drosophila melanogaster IP03331p pro...    27   9.5  
AE014134-3513|AAF57219.3|  819|Drosophila melanogaster CG12548-P...    27   9.5  
AE014134-3512|AAF57218.3|  852|Drosophila melanogaster CG12548-P...    27   9.5  

>AE013599-3411|AAF46860.1|  102|Drosophila melanogaster CG4269-PA
           protein.
          Length = 102

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +2

Query: 257 LDLCQRCAKLTKSKLAYPACCSKDLKARKWCSDYVXFG 370
           ++LC RCAK+TKS+  YP CC  +   + WC +YV FG
Sbjct: 63  MELCMRCAKVTKSEFVYPMCCGNEDGIKDWCREYVYFG 100


>BT025899-1|ABG02143.1|  770|Drosophila melanogaster IP03331p
           protein.
          Length = 770

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 252 RRLCDIQLTP*RSDCPAPTRAV-LRWRSEPVRYKG 151
           RRLCD+Q     SD  + T  + L+ ++EP++  G
Sbjct: 245 RRLCDVQTEAIESDMESETNIIKLQQQAEPIQQIG 279


>AE014134-3513|AAF57219.3|  819|Drosophila melanogaster CG12548-PB,
           isoform B protein.
          Length = 819

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 252 RRLCDIQLTP*RSDCPAPTRAV-LRWRSEPVRYKG 151
           RRLCD+Q     SD  + T  + L+ ++EP++  G
Sbjct: 308 RRLCDVQTEAIESDMESETNIIKLQQQAEPIQQIG 342


>AE014134-3512|AAF57218.3|  852|Drosophila melanogaster CG12548-PA,
           isoform A protein.
          Length = 852

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 252 RRLCDIQLTP*RSDCPAPTRAV-LRWRSEPVRYKG 151
           RRLCD+Q     SD  + T  + L+ ++EP++  G
Sbjct: 308 RRLCDVQTEAIESDMESETNIIKLQQQAEPIQQIG 342


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,670,176
Number of Sequences: 53049
Number of extensions: 325980
Number of successful extensions: 839
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)