Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20293
(563 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 127 2e-28
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 107 1e-22
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 100 2e-20
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 97 3e-19
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 96 4e-19
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 92 9e-18
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 89 5e-17
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 83 4e-15
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 80 4e-14
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 76 7e-13
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 75 9e-13
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 69 1e-10
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 66 7e-10
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 66 7e-10
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 64 3e-09
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 63 4e-09
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 62 1e-08
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 56 6e-07
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 55 1e-06
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 54 3e-06
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 51 2e-05
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 50 5e-05
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 48 1e-04
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 46 5e-04
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 45 0.001
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 42 0.008
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 40 0.053
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 38 0.12
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 37 0.37
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 36 0.65
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 36 0.65
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 34 2.0
UniRef50_Q337N5 Cluster: Expressed protein; n=4; Oryza sativa|Re... 33 3.5
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 32 8.1
UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa... 32 8.1
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 127 bits (307), Expect = 2e-28
Identities = 63/89 (70%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 237 HYKGQQLAK*CRCIXKS-LLYTLRGFKEK 320
HYKGQQ+ K + K ++Y R +EK
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREK 89
Score = 108 bits (260), Expect = 8e-23
Identities = 49/71 (69%), Positives = 62/71 (87%)
Frame = +2
Query: 254 VGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 433
+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+R+AK R
Sbjct: 67 IGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR 126
Query: 434 LAALGKDKGKY 466
+GK+KGKY
Sbjct: 127 --QVGKEKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 107 bits (258), Expect = 1e-22
Identities = 54/89 (60%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MKFN VTS R K HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 237 HYKGQQLAK*CRCIXKS-LLYTLRGFKEK 320
HY+GQQ+ K + K ++Y + +EK
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREK 89
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/71 (59%), Positives = 57/71 (80%)
Frame = +2
Query: 254 VGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 433
+GKV+QVYRKK+V+YI++++REKANG T VGIHPSK VI +LK+ +DRK IL+R+
Sbjct: 67 IGKVVQVYRKKYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILERK---- 121
Query: 434 LAALGKDKGKY 466
+GK+KGKY
Sbjct: 122 ---VGKEKGKY 129
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 100 bits (240), Expect = 2e-20
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 237 HYKG 248
YKG
Sbjct: 61 SYKG 64
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/70 (64%), Positives = 58/70 (82%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 436
GKV+QVYR+++V+++ERI REK NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR
Sbjct: 77 GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR- 135
Query: 437 AALGKDKGKY 466
A K KGK+
Sbjct: 136 -AADKAKGKF 144
Score = 39.9 bits (89), Expect = 0.040
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 126 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 254
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE 76
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 96.3 bits (229), Expect = 4e-19
Identities = 44/71 (61%), Positives = 58/71 (81%)
Frame = +2
Query: 254 VGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 433
+G V+QVYRKK+V+YIE +Q+EKANG T +VGIHPSK VI +LK++KDRK I +++AK
Sbjct: 49 IGTVVQVYRKKYVIYIEWVQQEKANGTTVHVGIHPSKAVITRLKLDKDRKKIPEQKAKSH 108
Query: 434 LAALGKDKGKY 466
A GK+KGKY
Sbjct: 109 QA--GKEKGKY 117
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/32 (68%), Positives = 25/32 (78%), Gaps = 2/32 (6%)
Frame = +3
Query: 168 LRQKFNVKSMPIRKDDEVQV--VRGHYKGQQL 257
L NV+SMP RKD+EVQV VRGHYKGQQ+
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQI 49
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 91.9 bits (218), Expect = 9e-18
Identities = 39/67 (58%), Positives = 55/67 (82%)
Frame = +3
Query: 54 RMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVR 233
+MKFNKQ++S+RRK RK HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV + R
Sbjct: 29 KMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICR 88
Query: 234 GHYKGQQ 254
GH G++
Sbjct: 89 GHNHGRE 95
Score = 78.6 bits (185), Expect = 9e-14
Identities = 31/56 (55%), Positives = 47/56 (83%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 424
GKV+++ RK+F +Y+ER+ REKANG + ++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 96 GKVVKINRKRFKIYVERVTREKANGESTFIGIHPSNVILTKLKIDKNRKKILDRKA 151
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 89.4 bits (212), Expect = 5e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Frame = +3
Query: 66 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 245
N + SSRRK+R HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 246 GQQ 254
G++
Sbjct: 65 GRE 67
Score = 72.1 bits (169), Expect = 8e-12
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 436
GKV VYR K+ +++ERI R+K+NG + + +HPS VI KL ++KDR+AIL+R KGR
Sbjct: 68 GKVTSVYRLKWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVGKGRE 127
Query: 437 AALGK 451
A K
Sbjct: 128 AVKAK 132
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 83.0 bits (196), Expect = 4e-15
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = +3
Query: 60 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 239
K + V+S RRK RK +F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGS 62
Query: 240 YKGQQ 254
KGQ+
Sbjct: 63 KKGQE 67
Score = 68.5 bits (160), Expect = 1e-10
Identities = 29/60 (48%), Positives = 44/60 (73%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 436
GK+ VYR KF V ++++ +EK NGA+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 68 GKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 79.8 bits (188), Expect = 4e-14
Identities = 36/64 (56%), Positives = 51/64 (79%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MK + +V+S RRK R+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 237 HYKG 248
+KG
Sbjct: 61 THKG 64
Score = 65.3 bits (152), Expect = 9e-10
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +2
Query: 251 TVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKG 430
T GKV VYRK++ + IE++ R KANG + I S+C+I K +N+DRK +L R+A
Sbjct: 65 TKGKVSSVYRKRWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLARKASA 124
Query: 431 RLAALGK 451
+++ GK
Sbjct: 125 KVSTKGK 131
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 75.8 bits (178), Expect = 7e-13
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +3
Query: 36 VAAKSDRMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDD 215
V+ + MK++ VTSSRRK RK HF+APS RR LMS+ LS EL+ + ++PIR +D
Sbjct: 13 VSLRRHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVND 72
Query: 216 EVQVVRGHYKGQQ 254
EV+V RG +K ++
Sbjct: 73 EVRVTRGSFKNRE 85
Score = 39.1 bits (87), Expect = 0.070
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANG 331
GKV+QVYRKK+V++I I R+K NG
Sbjct: 86 GKVVQVYRKKWVIHIANITRDKVNG 110
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 75.4 bits (177), Expect = 9e-13
Identities = 34/63 (53%), Positives = 50/63 (79%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MKFN +V+S+ K RK ++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 237 HYK 245
H K
Sbjct: 61 HQK 63
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 433
GKV V R K+V+ I+++ + KANG T V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 66 GKVTAVRRSKYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MK N VT+SRRK RK +F+A + R +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 237 HYKG 248
+KG
Sbjct: 61 GHKG 64
Score = 42.3 bits (95), Expect = 0.008
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVG--IHPSKCVIVKLKMNKDRKAILDRRAK- 427
GKV++V R+ + + +E I ++ N V IHPS C+I +L MN R + RR +
Sbjct: 66 GKVVEVRRRDYKICVEGINQKARNPEAKPVPYPIHPSNCIIKELYMNGSRYRAIKRRQER 125
Query: 428 --GRLAALGK 451
RLA +GK
Sbjct: 126 NAERLARIGK 135
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 65.7 bits (153), Expect = 7e-10
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR- 433
GKV+ V + + ++ REK NG T +V +HPS C+I KLKM+K RK +++RR GR
Sbjct: 68 GKVIAVKLSENRIVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIERRRAGRE 127
Query: 434 --LAALGKDK 457
LA LG +K
Sbjct: 128 KILAKLGHNK 137
Score = 49.2 bits (112), Expect = 7e-05
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
+K N ++S +K RK F+A + +S+ L+KE + VK +PIR+DDEV + G
Sbjct: 2 VKTNPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSG 61
Query: 237 HYKGQQ 254
+ G++
Sbjct: 62 KFAGRE 67
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 65.7 bits (153), Expect = 7e-10
Identities = 29/59 (49%), Positives = 43/59 (72%)
Frame = +3
Query: 78 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 254
+S RK RK F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE 64
Score = 40.3 bits (90), Expect = 0.030
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RKAILDR 418
G+V++V K+ +Y+E E+ANG Y IHPS +I++ ++ R+ I++R
Sbjct: 65 GEVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 63.7 bits (148), Expect = 3e-09
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = +3
Query: 138 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 254
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE 84
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 63.3 bits (147), Expect = 4e-09
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
M F K + RK RK F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG
Sbjct: 1 MAFTK--SKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG 58
Query: 237 HYKG 248
+KG
Sbjct: 59 DFKG 62
Score = 35.9 bits (79), Expect = 0.65
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 403
G+V++V K++ +Y+E ++ +G IHPS +I+KL +KD K
Sbjct: 65 GEVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = +3
Query: 90 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 254
RK RK +AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE 77
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 56.0 bits (129), Expect = 6e-07
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +3
Query: 69 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 248
KQ TSSRRK RK HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 249 QQ 254
++
Sbjct: 66 KE 67
Score = 38.7 bits (86), Expect = 0.093
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 433
G + ++ + + VYIE K +G A V I+PSK I K + RK L+R+ + R
Sbjct: 68 GVISKINYRDYKVYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 KQVTSSRRKNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 245
K +S K RKR + AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 246 GQQ 254
G +
Sbjct: 63 GHE 65
Score = 37.9 bits (84), Expect = 0.16
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 427
GKV V KK +++E KA+G IHPSK V+ +L ++ R+ L R K
Sbjct: 66 GKVTSVDVKKGRIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 53.6 bits (123), Expect = 3e-06
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = +3
Query: 78 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 248
+S RK K AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKG 63
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 251 TVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAK 427
T GKV +V K+ +Y++ +K +G Y IHPSK VIV+L + +K R A +D+ K
Sbjct: 64 TRGKVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRK 123
Query: 428 GRLAALG 448
R A G
Sbjct: 124 AREAKAG 130
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MK+ VT SRRKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 237 HYKGQ 251
+KG+
Sbjct: 61 DFKGK 65
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 49.6 bits (113), Expect = 5e-05
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +3
Query: 69 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 248
+ V+ RK RK ++AP HIR+ M + LS+ L +++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 249 QQ 254
+
Sbjct: 66 TE 67
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/60 (33%), Positives = 40/60 (66%)
Frame = +3
Query: 75 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 254
++S K RK ++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKM-NKDRKAILDRRAKGR 433
GKV++V RK+ V IE + ++KA+G YV +H SK +I KL +K+R ++R+ K R
Sbjct: 62 GKVVEVDRKRGRVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRKMR 121
Query: 434 LAALGKDKGK 463
K K
Sbjct: 122 EEYFSKKSPK 131
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 46.4 bits (105), Expect = 5e-04
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RKAILDRRA 424
GKV QV+ + + IE + R+KA+G Y+ IH SK I KL N RK I++R+A
Sbjct: 43 GKVTQVFPESGRIAIEGLTRKKADGTPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
Score = 35.9 bits (79), Expect = 0.65
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 150 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 248
+PLS EL +++ +K + IRKDD V+V+RG G
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYG 40
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +3
Query: 81 SSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 245
+++ +NR+ + A + R + + SPLSKELR K+ +S+ + + D V VVRG YK
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYK 56
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 42.3 bits (95), Expect = 0.008
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSP 155
M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 39.5 bits (88), Expect = 0.053
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 93 KNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 254
K RK AP H R + + LS +LR+++ +++ + D V+V+RG + G++
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE 60
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 38.3 bits (85), Expect = 0.12
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 156 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQ 251
LSK+LR+K+ ++S PI K D V+VV G KG+
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGE 40
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 36.7 bits (81), Expect = 0.37
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 75 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY 242
V+ K R+ AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDF 57
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 35.9 bits (79), Expect = 0.65
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 156 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQ 251
LSK+LR+K+ ++ P+ K D V+++ G KG+
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGE 41
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 35.9 bits (79), Expect = 0.65
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 90 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 248
+ K + A + + S LSK+L++K+ +S+ + + D V ++RG +KG
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKG 57
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 34.3 bits (75), Expect = 2.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -1
Query: 509 HLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 396
+L P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q337N5 Cluster: Expressed protein; n=4; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 1517
Score = 33.5 bits (73), Expect = 3.5
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 230 TWTLQRPTVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAI 409
+W L PT RK ++ IE+ R+ Y GI P + KLKMN D++ +
Sbjct: 970 SWALNFPTSCLTPSHRRKCALIEIEKNMRQAGKSLKEYAGIEPPN--MAKLKMNYDKEKL 1027
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 32.3 bits (70), Expect = 8.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 470 RCIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECR 345
+C C +++ +CPL+C + L CG + + KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKC---EQRCHKGRCQ 690
>UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0150000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 283
Score = 32.3 bits (70), Expect = 8.1
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1
Query: 254 LLAFVVSTYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHSPYM*RSTEMPLPVFPS*GSH 75
L A V ++L+ +V A+ G + ++ +G GH+ + R E+ LP P H
Sbjct: 131 LAALVAPPHHLHLVVLADGDGADVVLVAELGGEGGGHEDAADGGRRREVRLPALPPGARH 190
Query: 74 LLVELH 57
V LH
Sbjct: 191 AWVALH 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,743,030
Number of Sequences: 1657284
Number of extensions: 9829294
Number of successful extensions: 26425
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 25530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26412
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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