Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20293
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical pr... 92 2e-19
Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical p... 82 3e-16
Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical p... 29 3.1
AF039716-2|AAB96737.1| 462|Caenorhabditis elegans Hypothetical ... 28 4.0
Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81075-3|CAI79228.1| 192|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical ... 28 5.3
AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical ... 28 5.3
Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z73906-11|CAD36485.1| 136|Caenorhabditis elegans Hypothetical p... 27 7.0
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 27 7.0
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical
protein F28C6.7a protein.
Length = 142
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/70 (55%), Positives = 57/70 (81%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 436
G+V++ YRKKFV++I++I REKANG+T ++GIHPSK I KLK++KDR+A+++R+A GR
Sbjct: 67 GRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVERKAAGRS 126
Query: 437 AALGKDKGKY 466
G KGK+
Sbjct: 127 RVTGILKGKH 136
Score = 81.8 bits (193), Expect = 3e-16
Identities = 40/79 (50%), Positives = 54/79 (68%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 237 HYKGQQLAK*CRCIXKSLL 293
+KG + RC K +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
>Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical
protein F28C6.7c protein.
Length = 109
Score = 81.8 bits (193), Expect = 3e-16
Identities = 40/79 (50%), Positives = 54/79 (68%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 237 HYKGQQLAK*CRCIXKSLL 293
+KG + RC K +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSK 364
G+V++ YRKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 67 GRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSK 102
>Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical
protein F28C6.7b protein.
Length = 106
Score = 81.8 bits (193), Expect = 3e-16
Identities = 40/79 (50%), Positives = 54/79 (68%)
Frame = +3
Query: 57 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 236
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 237 HYKGQQLAK*CRCIXKSLL 293
+KG + RC K +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +2
Query: 257 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSK 364
G+V++ YRKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 67 GRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSK 102
>Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical
protein B0464.5a protein.
Length = 1003
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 35 RCSEERQNEVQQAGDFLKKEKQEEAFQCSFTYKASVDVLSPV 160
RCS+E N A D E Q+++F + + S+D +S +
Sbjct: 189 RCSDEDMNSCVSASDEEDVESQDDSFHVNDATEESIDSVSSI 230
>AF039716-2|AAB96737.1| 462|Caenorhabditis elegans Hypothetical
protein W03G9.3 protein.
Length = 462
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +3
Query: 69 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 248
K++ S R K ++P H++ + S L + + + K D + R H KG
Sbjct: 313 KEIFSDTRLELKLELTSPVHMKMDVFSVKLEPQQKTVLPEPTKETPKTDALLTPRSHIKG 372
Query: 249 QQLA 260
+ +A
Sbjct: 373 RSMA 376
>Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 326 WPFLFESSQCIQQTFXDTPASLC 258
W +F ++CI TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239
>Z81075-3|CAI79228.1| 192|Caenorhabditis elegans Hypothetical
protein F35C12.3b protein.
Length = 192
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 326 WPFLFESSQCIQQTFXDTPASLC 258
W +F ++CI TF + P SLC
Sbjct: 67 WRCMFAQNKCIGTTFQNIPISLC 89
>Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical
protein F35C12.3a protein.
Length = 368
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 326 WPFLFESSQCIQQTFXDTPASLC 258
W +F ++CI TF + P SLC
Sbjct: 243 WRCMFAQNKCIGTTFQNIPISLC 265
>AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 326 WPFLFESSQCIQQTFXDTPASLC 258
W +F ++CI TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239
>AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical
protein Y47H9B.2 protein.
Length = 317
Score = 27.9 bits (59), Expect = 5.3
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -1
Query: 500 KRPPWLWQFPRCIYPCLCQVQPVC 429
++ PW ++ +YP LC++ +C
Sbjct: 249 RKYPWYYKMSSAMYPALCELAGIC 272
>Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical
protein W08G11.3b protein.
Length = 511
Score = 27.5 bits (58), Expect = 7.0
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +3
Query: 54 RMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQ-----KFNVKSMPIRKDDE 218
R KF + + +K A + I+R+L S++L K N++ IRK+DE
Sbjct: 219 RQKFVQGAQLNVKKAEADLQLANAEIQRLLRELDSSQQLENSSITDKRNIEEELIRKEDE 278
Query: 219 VQVVRGHYKGQQLAK*CRCIXKSLLYTLRGFKEKRPMVQQHMSAFTL 359
+++ +YK L K + L LR K+++P V M+ T+
Sbjct: 279 IRL--ANYKSATLLKAANDKIEKL--ELR-LKQEKPAVHNEMTVETI 320
>Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical
protein W08G11.3a protein.
Length = 510
Score = 27.5 bits (58), Expect = 7.0
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +3
Query: 54 RMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQ-----KFNVKSMPIRKDDE 218
R KF + + +K A + I+R+L S++L K N++ IRK+DE
Sbjct: 218 RQKFVQGAQLNVKKAEADLQLANAEIQRLLRELDSSQQLENSSITDKRNIEEELIRKEDE 277
Query: 219 VQVVRGHYKGQQLAK*CRCIXKSLLYTLRGFKEKRPMVQQHMSAFTL 359
+++ +YK L K + L LR K+++P V M+ T+
Sbjct: 278 IRL--ANYKSATLLKAANDKIEKL--ELR-LKQEKPAVHNEMTVETI 319
>Z73906-11|CAD36485.1| 136|Caenorhabditis elegans Hypothetical
protein D2030.11 protein.
Length = 136
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +3
Query: 174 QKFNVKSMPIRKDDEVQ--VVRGHYKGQQLAK*CRCIXK--SLLYTLRGFKEKRPMVQQH 341
++F+ K + ++ D+ VQ + + K +QL K RC+ S T + F+E +V QH
Sbjct: 43 EEFHEK-LSVKMDEAVQRKMSKLDEKSEQLDKIFRCLMSMSSEAPTSQNFEEDSELVSQH 101
Query: 342 MSA 350
+SA
Sbjct: 102 LSA 104
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = -1
Query: 353 ECRHMLLHHWPFL-FESSQCIQQTFXDT---PASLCQLLAFVVSTY 228
+C+ +L WPFL E Q + D P +LCQ LA + Y
Sbjct: 137 DCQSEMLERWPFLQTEDVQLALFSPEDVALDPVALCQHLALIAKDY 182
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 60 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 239
KFN+ V RR N K+ P H + + +++++ + S+P K + H
Sbjct: 94 KFNEAVALFRRDNPKKQLLLPKHWDQSTCTQQVAQKITEIAKDLSVPYPKK-----LNQH 148
Query: 240 YKG 248
YKG
Sbjct: 149 YKG 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,017,117
Number of Sequences: 27780
Number of extensions: 254280
Number of successful extensions: 679
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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