Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20292
(444 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 25 0.43
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 1.7
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 5.2
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.9
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 21 6.9
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 6.9
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 20 9.2
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 24.6 bits (51), Expect = 0.43
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 260 EGELSDVECPYKLQNVQNNFE 198
EG++ E K+ N+QNNFE
Sbjct: 46 EGKVQVPEALKKIYNIQNNFE 66
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.6 bits (46), Expect = 1.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 343 KIKLICCEFCDFLGSAKIQ 287
KIK C+ CDF+ K++
Sbjct: 198 KIKTFKCKQCDFVAITKLE 216
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 196 ISKLFWTFWSL 228
IS L W FWSL
Sbjct: 565 ISTLGWFFWSL 575
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 12 ILSYHARTLKLHQ 50
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 12 ILSYHARTLKLHQ 50
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 12 ILSYHARTLKLHQ 50
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 12 ILSYHARTLKLHQ 50
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 12 ILSYHARTLKLHQ 50
+L+YH RT +H+
Sbjct: 295 VLNYHHRTADIHE 307
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 202 KLFWTFWSLYGHSTSDSSPSN 264
KL+W F GH+ D + N
Sbjct: 58 KLWWEFCQRNGHNCLDFTVQN 78
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 320 ILRLSW*CQDSVCPSACVV 264
IL SW C D+V S ++
Sbjct: 1036 ILAFSWACNDAVMTSDSIM 1054
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 20.2 bits (40), Expect = 9.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 73 NQDKQILRCNYIFIFFFLKNLI 138
N D +I CN IF+ L +L+
Sbjct: 663 NFDIEIALCNGIFLLLTLGSLL 684
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,697
Number of Sequences: 336
Number of extensions: 1851
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9985735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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