Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20291
         (526 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    29   0.095
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    24   3.6  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   3.6  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 0.095
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 96  IVRDYFHTLAVTISYYGQYERIPL 25
           I R+YF+T++V   +YG+ ER P+
Sbjct: 310 IWREYFYTMSVQNPHYGEMERNPI 333


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 270 PFLVEPINRLYMPRG 226
           P L++PIN +Y P G
Sbjct: 474 PLLIDPINLMYGPAG 488


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 446 VDASRNXYRRLAECICSSEVSSGRSHR 526
           + + R+ YR +   IC  EV S RS R
Sbjct: 715 ISSKRSGYRNIPVNICGVEVRSKRSIR 741


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,517
Number of Sequences: 2352
Number of extensions: 11616
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)