Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20291
         (526 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122220-1|AAM52732.1|  273|Drosophila melanogaster LP11234p pro...   153   1e-37
AE014134-937|AAN10546.1|  273|Drosophila melanogaster CG6957-PB,...   153   1e-37
AE014134-936|AAF52263.1|  273|Drosophila melanogaster CG6957-PA,...   153   1e-37
AY119005-1|AAM50865.1|  701|Drosophila melanogaster LP03332p pro...    29   5.1  
AE014296-2095|AAF49958.1|  701|Drosophila melanogaster CG6806-PA...    29   5.1  

>AY122220-1|AAM52732.1|  273|Drosophila melanogaster LP11234p
           protein.
          Length = 273

 Score =  153 bits (371), Expect = 1e-37
 Identities = 65/84 (77%), Positives = 72/84 (85%)
 Frame = +1

Query: 256 FHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVLDGNAXDL 435
           FHK+GK+SF+YV TFNMDEYVGL RDH ESYHY+MWN FFKHIDIEP N H+LDGNA DL
Sbjct: 55  FHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADL 114

Query: 436 VVECRRFEKLIQEAGGVHLFIGGI 507
           V EC +FE  I+EAGGV LFIGGI
Sbjct: 115 VAECNKFEDQIREAGGVELFIGGI 138



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = +2

Query: 95  MRLIILEDASIVADWAARFVLQRITQFAPGPGRHFVXXXXXXXXXXXMYKRLIGSTRKG 271
           MRL+ILE +  V  WAA++V++RI  F P   R+FV           MYK LI   ++G
Sbjct: 1   MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQG 59


>AE014134-937|AAN10546.1|  273|Drosophila melanogaster CG6957-PB,
           isoform B protein.
          Length = 273

 Score =  153 bits (371), Expect = 1e-37
 Identities = 65/84 (77%), Positives = 72/84 (85%)
 Frame = +1

Query: 256 FHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVLDGNAXDL 435
           FHK+GK+SF+YV TFNMDEYVGL RDH ESYHY+MWN FFKHIDIEP N H+LDGNA DL
Sbjct: 55  FHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADL 114

Query: 436 VVECRRFEKLIQEAGGVHLFIGGI 507
           V EC +FE  I+EAGGV LFIGGI
Sbjct: 115 VAECNKFEDQIREAGGVELFIGGI 138



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = +2

Query: 95  MRLIILEDASIVADWAARFVLQRITQFAPGPGRHFVXXXXXXXXXXXMYKRLIGSTRKG 271
           MRL+ILE +  V  WAA++V++RI  F P   R+FV           MYK LI   ++G
Sbjct: 1   MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQG 59


>AE014134-936|AAF52263.1|  273|Drosophila melanogaster CG6957-PA,
           isoform A protein.
          Length = 273

 Score =  153 bits (371), Expect = 1e-37
 Identities = 65/84 (77%), Positives = 72/84 (85%)
 Frame = +1

Query: 256 FHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWNEFFKHIDIEPSNAHVLDGNAXDL 435
           FHK+GK+SF+YV TFNMDEYVGL RDH ESYHY+MWN FFKHIDIEP N H+LDGNA DL
Sbjct: 55  FHKQGKVSFQYVKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADL 114

Query: 436 VVECRRFEKLIQEAGGVHLFIGGI 507
           V EC +FE  I+EAGGV LFIGGI
Sbjct: 115 VAECNKFEDQIREAGGVELFIGGI 138



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = +2

Query: 95  MRLIILEDASIVADWAARFVLQRITQFAPGPGRHFVXXXXXXXXXXXMYKRLIGSTRKG 271
           MRL+ILE +  V  WAA++V++RI  F P   R+FV           MYK LI   ++G
Sbjct: 1   MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQG 59


>AY119005-1|AAM50865.1|  701|Drosophila melanogaster LP03332p
           protein.
          Length = 701

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 301 NMDEYVGLPRDHPESYHYYMWNEFFKHID-IEPSNAHVLD 417
           N+  Y G+P+ H E++H +     ++HI+ +E     V+D
Sbjct: 298 NLRTYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMD 337


>AE014296-2095|AAF49958.1|  701|Drosophila melanogaster CG6806-PA
           protein.
          Length = 701

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 301 NMDEYVGLPRDHPESYHYYMWNEFFKHID-IEPSNAHVLD 417
           N+  Y G+P+ H E++H +     ++HI+ +E     V+D
Sbjct: 298 NLRTYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMD 337


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,362,309
Number of Sequences: 53049
Number of extensions: 569777
Number of successful extensions: 1911
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1911
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)