Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20291
(526 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 26 0.27
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 23 2.5
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 23 2.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 3.3
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 22 3.3
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 4.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 4.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 4.4
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 5.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.7
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 7.7
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 7.7
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 25.8 bits (54), Expect = 0.27
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 340 ESYHYYMWNEFFKHIDIEPSNAHVLDGNAXDLVVE-CRR 453
ES Y W HID +P + + A +V+E C+R
Sbjct: 183 ESNENYNWEHKETHIDWQPEDEECTEATAGAVVLETCQR 221
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 299 KVVTYLKDNFPSLWNL 252
KVV +L DN P +W L
Sbjct: 88 KVVQFLIDNKPEIWVL 103
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 241 VHAEGRPTGGQAQHEVSSRTRSE 173
+ A+ PTG QH + +R + E
Sbjct: 104 LEAKYDPTGAYKQHYLQNRVKEE 126
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 299 KVVTYLKDNFPSLWNL 252
KVV +L DN P +W L
Sbjct: 88 KVVQFLIDNKPEIWVL 103
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 241 VHAEGRPTGGQAQHEVSSRTRSE 173
+ A+ PTG QH + +R + E
Sbjct: 104 LEAKYDPTGAYKQHYLQNRVKEE 126
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -3
Query: 500 PMNKCTPPASCXSFSKRRHSTTKSXALPSSTCALLG 393
P +C PP S H + P +T LLG
Sbjct: 1697 PNRRCPPPPRMGSAEGLSHRGMEDEICPYATFHLLG 1732
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 22.2 bits (45), Expect = 3.3
Identities = 7/29 (24%), Positives = 15/29 (51%)
Frame = -3
Query: 320 PTYSSMLKVVTYLKDNFPSLWNLSTVCTC 234
P+Y+ + +YL+ + +W + C C
Sbjct: 49 PSYACRGRCSSYLQVSGSKIWQMERSCMC 77
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 299 KVVTYLKDNFPSLWN 255
KV+ +L +N P LW+
Sbjct: 89 KVIKFLVENKPELWD 103
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 299 KVVTYLKDNFPSLWN 255
KV+ +L +N P LW+
Sbjct: 89 KVIKFLVENKPELWD 103
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3
Query: 299 KVVTYLKDNFPSLWN 255
KV+ +L +N P LW+
Sbjct: 89 KVIKFLVENKPELWD 103
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 5.8
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -2
Query: 219 PVGRPSTKCLPGPGANCVIRCRTNLAAQSAT 127
P+G+ +KC C + +TNL+ S++
Sbjct: 703 PIGKALSKCHNRNVTTCNMFRKTNLSGDSSS 733
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 7.7
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -1
Query: 241 VHAEGRPTGGQAQHEVSSRTRSELRDPLQDESGGPVGNDAG 119
V+ G Q V SR L PL+ E G P G G
Sbjct: 366 VYRPGENPVTQRLPAVLSRIGIILASPLKREGGPPTGATTG 406
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 63 SPLTCESNPELCVL 104
SP CE NP+L +L
Sbjct: 83 SPPFCEKNPKLGIL 96
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 63 SPLTCESNPELCVL 104
SP CE NP+L +L
Sbjct: 84 SPPFCEKNPKLGIL 97
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,988
Number of Sequences: 438
Number of extensions: 3290
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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