Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20290
         (548 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048093-1|AAH48093.1|  914|Homo sapiens trafficking protein, ki...    30   4.6  
BC041330-1|AAH41330.1|  914|Homo sapiens trafficking protein, ki...    30   4.6  
BC040668-1|AAH40668.1|  914|Homo sapiens trafficking protein, ki...    30   4.6  
AL832573-1|CAD89935.1|  779|Homo sapiens hypothetical protein pr...    30   4.6  
AC007256-1|AAY24227.1|  883|Homo sapiens unknown protein.              30   4.6  
AB038964-1|BAB32550.1|  914|Homo sapiens amyotrophic lateral scl...    30   4.6  
AB038951-1|BAB32501.1|  914|Homo sapiens amyotrophic lateral scl...    30   4.6  

>BC048093-1|AAH48093.1|  914|Homo sapiens trafficking protein,
           kinesin binding 2 protein.
          Length = 914

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 251 VLNKINDI-HNFYTKVIENEKKLLCYHTSKDQVRNSVQTANEMQDVNIE 394
           +L++I D+ H     VIE E+  L    SKD  R      +E+QD N+E
Sbjct: 287 LLSQIVDLQHKLKEHVIEKEELKLHLQASKDAQRQLTMELHELQDRNME 335


>BC041330-1|AAH41330.1|  914|Homo sapiens trafficking protein,
           kinesin binding 2 protein.
          Length = 914

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 251 VLNKINDI-HNFYTKVIENEKKLLCYHTSKDQVRNSVQTANEMQDVNIE 394
           +L++I D+ H     VIE E+  L    SKD  R      +E+QD N+E
Sbjct: 287 LLSQIVDLQHKLKEHVIEKEELKLHLQASKDAQRQLTMELHELQDRNME 335


>BC040668-1|AAH40668.1|  914|Homo sapiens trafficking protein,
           kinesin binding 2 protein.
          Length = 914

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 251 VLNKINDI-HNFYTKVIENEKKLLCYHTSKDQVRNSVQTANEMQDVNIE 394
           +L++I D+ H     VIE E+  L    SKD  R      +E+QD N+E
Sbjct: 287 LLSQIVDLQHKLKEHVIEKEELKLHLQASKDAQRQLTMELHELQDRNME 335


>AL832573-1|CAD89935.1|  779|Homo sapiens hypothetical protein
           protein.
          Length = 779

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 251 VLNKINDI-HNFYTKVIENEKKLLCYHTSKDQVRNSVQTANEMQDVNIE 394
           +L++I D+ H     VIE E+  L    SKD  R      +E+QD N+E
Sbjct: 193 LLSQIVDLQHKLKEHVIEKEELKLHLQASKDAQRQLTMELHELQDRNME 241


>AC007256-1|AAY24227.1|  883|Homo sapiens unknown protein.
          Length = 883

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 251 VLNKINDI-HNFYTKVIENEKKLLCYHTSKDQVRNSVQTANEMQDVNIE 394
           +L++I D+ H     VIE E+  L    SKD  R      +E+QD N+E
Sbjct: 256 LLSQIVDLQHKLKEHVIEKEELKLHLQASKDAQRQLTMELHELQDRNME 304


>AB038964-1|BAB32550.1|  914|Homo sapiens amyotrophic lateral
           sclerosis 2 protein.
          Length = 914

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 251 VLNKINDI-HNFYTKVIENEKKLLCYHTSKDQVRNSVQTANEMQDVNIE 394
           +L++I D+ H     VIE E+  L    SKD  R      +E+QD N+E
Sbjct: 287 LLSQIVDLQHKLKEHVIEKEELKLHLQASKDAQRQLTMELHELQDRNME 335


>AB038951-1|BAB32501.1|  914|Homo sapiens amyotrophic lateral
           sclerosis 2 protein.
          Length = 914

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 251 VLNKINDI-HNFYTKVIENEKKLLCYHTSKDQVRNSVQTANEMQDVNIE 394
           +L++I D+ H     VIE E+  L    SKD  R      +E+QD N+E
Sbjct: 287 LLSQIVDLQHKLKEHVIEKEELKLHLQASKDAQRQLTMELHELQDRNME 335


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,237,979
Number of Sequences: 237096
Number of extensions: 1125610
Number of successful extensions: 2872
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2872
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)