Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20288
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   1.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   1.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   3.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   6.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   6.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   6.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       20   8.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   8.5  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 211 WCRSYTSNYD 182
           WC  YT+ YD
Sbjct: 15  WCEQYTTKYD 24


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -3

Query: 228 LLPSPSGVGVIPATTMYFPVRWLR-NLSRTDSEILALVR 115
           L P P+ V  I +T + FP R ++ N+    +E+   +R
Sbjct: 71  LWPQPTSVTKISSTLLKFPYRSIKFNIPDEKNEVNDFLR 109



 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = +1

Query: 184 RSCWYNSDTTWGRQKHHSNR 243
           +  WY     WG  ++H+ R
Sbjct: 484 KDAWYLDHGFWGTTEYHNWR 503


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = -3

Query: 288 CKCVLPAMCCQPCT-SPIRVVLLPSPSGVGVIPATTMYFPVRWLRNL 151
           C   LP     P    PI    + +PS +    A  ++  V+W+R++
Sbjct: 171 CNNYLPLPQVPPLPLPPIFAPTMINPSAICESAAQLLFMNVQWVRSI 217


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 55  RHRRAGSRDRSVSER 99
           R  R+GS   S+SER
Sbjct: 802 RRERSGSESSSISER 816


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 217 GRQKHHSNRAGARLTAHRGKNAFAC 291
           G++   S+     L  H G+  FAC
Sbjct: 353 GKRFTRSDELQRHLRTHTGEKRFAC 377


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 162 TNAQGNTS*LLV*LRHHLGK 221
           TN Q NT   +  L HHL K
Sbjct: 495 TNKQLNTLNKICALHHHLSK 514


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 162 TNAQGNTS*LLV*LRHHLGK 221
           TN Q NT   +  L HHL K
Sbjct: 220 TNKQLNTLNKICALHHHLSK 239


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 6/31 (19%), Positives = 15/31 (48%)
 Frame = -2

Query: 121 STSILRHLARTQTDLCCQLSDVFRLLRTSYH 29
           + ++L H ++   D+C  + +   +    YH
Sbjct: 106 TNNVLVHRSQNSNDVCLAIPESLVIKLVDYH 136


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 285 KCVLPAMCCQPCTSPIRVVLLPS 217
           KC  PA    P + P+    LP+
Sbjct: 36  KCPKPAPIYSPVSKPVSFESLPN 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,222
Number of Sequences: 336
Number of extensions: 1977
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)