Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20283
         (468 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74...    31   0.35 
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090...    31   0.35 
04_04_1323 + 32644956-32645096,32645488-32646126,32646701-326469...    28   3.3  
02_05_0785 - 31730300-31730701,31730785-31730856,31730940-317328...    27   5.7  
12_01_0402 - 3179365-3180343,3180907-3182530,3183357-3183768           27   7.5  
11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989           27   7.5  

>03_01_0093 -
           745434-746057,746492-747112,747222-747791,747870-747948,
           748258-748331,748385-748387
          Length = 656

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 19/76 (25%), Positives = 35/76 (46%)
 Frame = +1

Query: 25  FAKTPYKELINVTVGKPLGQLLISNLLHLPCIEKVFPDSEPVITDLPINLLKNAPKNISV 204
           F  T  KE     +GK + + +I+   +    ++        I  L +  + N P   ++
Sbjct: 149 FVLTKMKETAESYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAAL 208

Query: 205 IYGSNDKEGLFFVSEV 252
            YG+N+KEGL  V ++
Sbjct: 209 SYGTNNKEGLIAVFDL 224


>02_05_0916 -
           32706039-32706332,32707483-32708103,32708450-32709070,
           32709183-32709752,32709840-32709918,32710002-32710075,
           32711336-32711398
          Length = 773

 Score = 31.5 bits (68), Expect = 0.35
 Identities = 19/76 (25%), Positives = 35/76 (46%)
 Frame = +1

Query: 25  FAKTPYKELINVTVGKPLGQLLISNLLHLPCIEKVFPDSEPVITDLPINLLKNAPKNISV 204
           F  T  KE     +GK + + +I+   +    ++        I  L +  + N P   ++
Sbjct: 169 FVLTKMKETAESYLGKTVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAAL 228

Query: 205 IYGSNDKEGLFFVSEV 252
            YG+N+KEGL  V ++
Sbjct: 229 SYGTNNKEGLIAVFDL 244


>04_04_1323 + 32644956-32645096,32645488-32646126,32646701-32646907,
            32647020-32647100,32647686-32648566,32648641-32648932,
            32649657-32650673,32651334-32651605,32651992-32652493
          Length = 1343

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 63   RWETPWSTFNFEFITFTLHRESLPRFG 143
            R+ TP++T +F+ IT  LH+    R+G
Sbjct: 1158 RYATPFTTASFDVITDQLHKAGFSRWG 1184


>02_05_0785 -
           31730300-31730701,31730785-31730856,31730940-31732864,
           31733000-31733150,31733944-31734009,31734247-31734645
          Length = 1004

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 331 SVSRSDENLKSDPVIFNLL 275
           S+SR  E LK DPV+F++L
Sbjct: 671 SLSRMKEKLKDDPVLFDIL 689


>12_01_0402 - 3179365-3180343,3180907-3182530,3183357-3183768
          Length = 1004

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +1

Query: 7   QELYDIFAKTPYKELINVTVGKPLGQLLIS 96
           +E+++IF K+ + +++   + KPLG  L+S
Sbjct: 645 EEVHEIFTKSFFWDVLQQQLSKPLGSELVS 674


>11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989
          Length = 371

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 285 KITGSDFKFSSDLETDEVTSKVKEFYFGENTISWETRMILS 407
           K TGS F FS+ +E D  T  +   YF E +  ++ R  L+
Sbjct: 147 KRTGSPFSFSNGVEIDHETGVI---YFTETSTRFQRREFLN 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,071,498
Number of Sequences: 37544
Number of extensions: 204289
Number of successful extensions: 476
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)