Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20283
(468 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 26 0.57
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 26 0.57
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 26 0.57
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 24 2.3
AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram nega... 24 3.0
AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram nega... 24 3.0
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 23 4.0
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 5.3
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 23 7.0
AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transpor... 23 7.0
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 22 9.3
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 26.2 bits (55), Expect = 0.57
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 55 NVTVGKPLGQLLISNLLHLPCIEKVFPDSEPVITDLPINLLKNAPKNISVIYGSNDKEGL 234
+V V G L I +P ++ F D P +L K ++ GSN +EG
Sbjct: 434 HVLVNNEWGTLGICEFPFVPVVDGAFLDETP-----QRSLASGRFKKTEILTGSNTEEGY 488
Query: 235 FFV 243
+F+
Sbjct: 489 YFI 491
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 26.2 bits (55), Expect = 0.57
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 55 NVTVGKPLGQLLISNLLHLPCIEKVFPDSEPVITDLPINLLKNAPKNISVIYGSNDKEGL 234
+V V G L I +P ++ F D P +L K ++ GSN +EG
Sbjct: 434 HVLVNNEWGTLGICEFPFVPVVDGAFLDETP-----QRSLASGRFKKTEILTGSNTEEGY 488
Query: 235 FFV 243
+F+
Sbjct: 489 YFI 491
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 26.2 bits (55), Expect = 0.57
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 55 NVTVGKPLGQLLISNLLHLPCIEKVFPDSEPVITDLPINLLKNAPKNISVIYGSNDKEGL 234
+V V G L I +P ++ F D P +L K ++ GSN +EG
Sbjct: 320 HVLVNNEWGTLGICEFPFVPVVDGAFLDETP-----QRSLASGRFKKTEILTGSNTEEGY 374
Query: 235 FFV 243
+F+
Sbjct: 375 YFI 377
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 24.2 bits (50), Expect = 2.3
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +3
Query: 15 IRHICKNSIQRVDKCHRWETPWSTFNFEFITFTLHRESLPRFGTRHN*PTYKFTKKCTEE 194
I+H + +IQ V H + + I T+ + ++ + H Y+F+ +E
Sbjct: 35 IQHHARPAIQHVGSIHAAPAIYQ-HSAPAIVKTIAQPTIIKSVEHHAPANYEFSYSVHDE 93
Query: 195 HFGDLR 212
H GD++
Sbjct: 94 HTGDIK 99
>AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 23.8 bits (49), Expect = 3.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 220 HSSRRSPKCSSVHFLVNL*VG 158
H +R +P HF++NL VG
Sbjct: 314 HGTRMAPFDQEFHFIINLAVG 334
>AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 23.8 bits (49), Expect = 3.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 220 HSSRRSPKCSSVHFLVNL*VG 158
H +R +P HF++NL VG
Sbjct: 314 HGTRMAPFDQEFHFIINLAVG 334
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 23.4 bits (48), Expect = 4.0
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +3
Query: 15 IRHICKNSIQRVDKCHRWETPWSTFNFEFITFTLHRESLPRFGTRHN*PTYKFTKKCTEE 194
I+H +IQ V H + + I T+ + ++ + H Y+F+ +E
Sbjct: 35 IQHHAAPAIQHVGSVHALPAIYQ-HSAPAIVKTIAQPTIIKSVEHHAPANYEFSYSVHDE 93
Query: 195 HFGDLR 212
H GD++
Sbjct: 94 HTGDIK 99
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.0 bits (47), Expect = 5.3
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 DPQELYDIFAKTPYKELINVTVGKPLGQLLISNLLHLPCIEKVFP-DSEPVITDLP 165
DP LY I K L V KP+ + L S L + + P + P T P
Sbjct: 1274 DPHSLYAIPNKVKPSPLAGAAVPKPMDRSLRSILAEQSELSPIKPCQTNPFRTSTP 1329
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 22.6 bits (46), Expect = 7.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 4 PQELYDIFAKTPY 42
PQE+Y I++K PY
Sbjct: 100 PQEIYFIWSKYPY 112
>AF533893-1|AAM97678.1| 570|Anopheles gambiae ascorbate transporter
protein.
Length = 570
Score = 22.6 bits (46), Expect = 7.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 127 VFPDSEPVITDLPINLLKNA 186
VFP+ P TD+ + +L++A
Sbjct: 269 VFPEGHPARTDVRLRVLQDA 288
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 22.2 bits (45), Expect = 9.3
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 76 LGQLLISNL-LHLPCIEKVFPDSEPVITDLPINLLKNAPKNISVIYGSNDKEG 231
L Q L+S + +H +E+ D+ P + +NAPK + + KEG
Sbjct: 545 LPQHLLSRVPIHNKLMEQGLLDALPARQKALVLPKRNAPKALEALVKDEPKEG 597
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,604
Number of Sequences: 2352
Number of extensions: 8982
Number of successful extensions: 34
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -