Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20283
         (468 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g18670.1 68414.m02330 protein kinase family protein contains ...    30   0.90 
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p...    29   1.6  
At2g34680.1 68415.m04260 leucine-rich repeat family protein cont...    28   2.7  
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)...    27   4.8  
At5g42770.1 68418.m05209 Maf family protein contains Pfam domain...    27   8.4  
At1g68000.1 68414.m07768 CDP-diacylglycerol--inositol 3-phosphat...    27   8.4  

>At1g18670.1 68414.m02330 protein kinase family protein contains
           Protein kinases ATP-binding region signature,
           PROSITE:PS00107 and Serine/Threonine protein kinases
           active-site signature, PROSITE:PS00108
          Length = 662

 Score = 29.9 bits (64), Expect = 0.90
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 225 RRTVFCIRSYNETLAENNKLKITGSDFKFSSDLETDEVTS-KVKEFYFGENTIS 383
           R+   C+RS+N +L+  +   + G    FS + + D   + K KE   GE T S
Sbjct: 552 RKDDICVRSHNRSLSRGHIPNLLGPSPAFSENTDVDSKNNEKEKEEKHGERTDS 605


>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
           putative / HSP70, mitochondrial, putative strong
           similarity to SP|Q01899 Heat shock 70 kDa protein,
           mitochondrial precursor {Phaseolus vulgaris}
          Length = 682

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 16/73 (21%), Positives = 33/73 (45%)
 Frame = +1

Query: 34  TPYKELINVTVGKPLGQLLISNLLHLPCIEKVFPDSEPVITDLPINLLKNAPKNISVIYG 213
           T  KE     +GK + + +++   +    ++        I  L +  + N P   ++ YG
Sbjct: 171 TKMKETAEAYLGKSINKAVVTVPAYFNDAQRQATKDAGKIAGLDVQRIINEPTAAALSYG 230

Query: 214 SNDKEGLFFVSEV 252
            N+KEG+  V ++
Sbjct: 231 MNNKEGVIAVFDL 243


>At2g34680.1 68415.m04260 leucine-rich repeat family protein contains
            leucine rich repeat (LRR) domains, Pfam:PF00560;
            identical to cDNA hypothetical protein (AIR9) mRNA,
            partial cds GI:3695020
          Length = 1661

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = -3

Query: 295  PVIFNLLFSANVSL*LLIQKTVLLYHSSRRSPKCSSVHFLVNL*VGQ 155
            P++  ++ S+++     + + VL+  + R  P C S+ FL ++  GQ
Sbjct: 990  PIVAGIILSSHLLSSFAVSEGVLISMNERGHPNCQSLEFLGSMIEGQ 1036


>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
           identical to heat shock protein 70 [Arabidopsis
           thaliana] GI:6746590
          Length = 682

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 17/76 (22%), Positives = 33/76 (43%)
 Frame = +1

Query: 25  FAKTPYKELINVTVGKPLGQLLISNLLHLPCIEKVFPDSEPVITDLPINLLKNAPKNISV 204
           F  T  KE     +GK + + +++   +    ++        I  L +  + N P   ++
Sbjct: 173 FILTKMKETAEAYLGKSVTKAVVTVPAYFNDAQRQATKDAGRIAGLDVERIINEPTAAAL 232

Query: 205 IYGSNDKEGLFFVSEV 252
            YG  +KEGL  V ++
Sbjct: 233 SYGMTNKEGLIAVFDL 248


>At5g42770.1 68418.m05209 Maf family protein contains Pfam domain
           PF02545: Maf-like protein
          Length = 233

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = +1

Query: 1   DPQELY--DIFAKTPYKELINVTVGKPLGQLLISNLLHLPCIEKVFPDSEPVITDLPINL 174
           D  E+Y  +I  +T  K +    V K  G LLI + L LPC+++V   ++ V+  LP  L
Sbjct: 163 DRVEIYFNEIPEETIEKLIEEGMVLKVAGALLIEHPLILPCVKEVVGTTDSVM-GLPKEL 221

Query: 175 LKNAPKNI 198
            +   K +
Sbjct: 222 TEKLIKEV 229


>At1g68000.1 68414.m07768 CDP-diacylglycerol--inositol
           3-phosphatidyltransferase / phosphatidylinositol
           synthase (PIS1) identical to phosphatidylinositol
           synthase (PIS1) GB:AJ000539 [gi:3367632]
          Length = 227

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 392 CFPAYGIFSKIKFFNFRCDLISF*I*RKF 306
           CF    +FS + FF+F CD +   + R+F
Sbjct: 37  CFSNKPLFSVLYFFSFCCDAVDGWVARRF 65


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,707,692
Number of Sequences: 28952
Number of extensions: 189107
Number of successful extensions: 537
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 791932800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)