Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20282
         (496 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.37 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.5  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.1  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 89  WTKDGKEIVKSYFPI-QFRVIFTEQTVKLINKRDHHALKLIDQ 214
           +T   KE++   F + +FR+    Q  K+I + DH ALK + +
Sbjct: 642 YTTTEKELLGVIFALHKFRIYI--QVTKIIIRTDHQALKFLSR 682


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 289  VLENNRVYFKIMSTEDKQYLKLDNTK 366
            ++E   VY+K +ST+DK  +K  + K
Sbjct: 1230 IVEYYTVYYKPVSTDDKTEVKPTSQK 1255


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 128 PIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKI 232
           P Q ++ F     K   KR  H   + DQQN+N +
Sbjct: 81  PTQVKIWFQNHRYK--TKRAQHEKGMHDQQNNNPL 113


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
 Frame = +2

Query: 65  TMDFAYQLWTKDG---KEIVKS--YFPIQFRVIFTEQT 163
           ++D+A + WTK G    +IV    +F   F + FT +T
Sbjct: 395 SVDYAVKFWTKKGFPKSKIVLGVPFFGRSFTLQFTNET 432


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +2

Query: 5   KKGEVIKEAXKRXIENGKRNTMDFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKL 172
           K GE+I +      E   +  M F+ Q+  +        +FPI + ++F+E  + L
Sbjct: 662 KAGELIHKIETNDHEIIDKIEM-FSLQILNERAGFSAAGFFPIDYSLVFSETKLLL 716


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 69  WTSPTSYGQRMERK 110
           WT+P+ Y ++ ER+
Sbjct: 549 WTNPSDYVKQTERR 562


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 56  KRNTMDFAYQLWTKDG 103
           K+ T+DF+ + W K G
Sbjct: 735 KKLTVDFSAREWVKQG 750


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,109
Number of Sequences: 336
Number of extensions: 2255
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)