Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20282
         (496 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   1.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   3.3  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   4.3  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   5.7  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         23   7.6  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         22   10.0 
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         22   10.0 
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         22   10.0 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    22   10.0 

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 319  IMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHHWYLEPSMYESDV 462
            +M+ +D     +D T G SDD    GD T     +     PS+ ES +
Sbjct: 971  VMAGDDMMMESVDLTIGGSDDGSFAGDKTHSASPNR-LESPSLNESSL 1017


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 319  IMSTEDKQYLKLDNTKGSSDDRIIYGDST 405
            +M+ +D     +D T G SDD    GD T
Sbjct: 969  VMAGDDMMMESVDLTIGGSDDGSFAGDKT 997


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 356 ITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 445
           I  +V+  T SS+   PLTP+   G ++PP
Sbjct: 451 IGSRVIQRTPSSS--PPLTPNTICGLIAPP 478


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 167 KLINKRDHHALKLIDQQNHNKIAFGDSKDKPAXKSPGSLP 286
           K   KRD++A +   Q+   K + G SK     K   SLP
Sbjct: 129 KEARKRDNNARQRSAQRETPKSSGGQSKQPKKKKKKRSLP 168


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 353 SITRKVLVMTVSSTVIAPLTPSNTTGTLSPPC 448
           +ITR    +   ST     T    T T  PPC
Sbjct: 113 TITRTKATVAPKSTTTTTTTTVKPTTTTPPPC 144


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +2

Query: 353 SITRKVLVMTVSSTVIAPLTPSNTTGTLSPPC 448
           ++TR    +   ST     T    T T  PPC
Sbjct: 113 TVTRTKATVAPKSTTTTTTTTVKPTTTTPPPC 144


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +2

Query: 353 SITRKVLVMTVSSTVIAPLTPSNTTGTLSPPC 448
           ++TR    +   ST     T    T T  PPC
Sbjct: 113 TVTRTKATVAPKSTTTTTTTTVKPTTTTPPPC 144


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +2

Query: 353 SITRKVLVMTVSSTVIAPLTPSNTTGTLSPPC 448
           ++TR    +   ST     T    T T  PPC
Sbjct: 113 TVTRTKATVAPKSTTTTTTTTVKPTTTTPPPC 144


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 158 QTVKLINKRDHHALKLIDQQNHNKI 232
           +T+ L+N+   HAL    +Q H ++
Sbjct: 600 RTLNLLNRSTDHALLAQKRQEHQRL 624


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,931
Number of Sequences: 2352
Number of extensions: 9529
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)