Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20282
(496 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 30 3.8
BC130422-1|AAI30423.1| 2210|Homo sapiens mediator complex subuni... 30 3.8
BC126135-1|AAI26136.1| 173|Homo sapiens calcium binding protein... 30 3.8
BC126133-1|AAI26134.1| 173|Homo sapiens calcium binding protein... 30 3.8
AY338463-1|AAR08418.1| 2210|Homo sapiens thyroid hormone recepto... 30 3.8
AL133033-1|CAB61363.1| 1908|Homo sapiens hypothetical protein pr... 30 3.8
AK023837-1|BAB14697.1| 1111|Homo sapiens nent TRAP240 mRNA. pro... 30 3.8
AF515599-1|AAQ08182.1| 2210|Homo sapiens PROSIT240 protein. 30 3.8
AF170815-1|AAF25798.1| 173|Homo sapiens CaBP5 protein. 30 3.8
AF169159-1|AAF25793.1| 173|Homo sapiens CaBP5 protein. 30 3.8
AB028948-1|BAA82977.2| 1917|Homo sapiens KIAA1025 protein protein. 30 3.8
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 30 5.1
AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B pr... 30 5.1
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 30.3 bits (65), Expect = 3.8
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 290 CWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 445
C T +S + P T T +T + T ++T + PS+T GT PP
Sbjct: 1618 CPSTPATSSTATPSSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPPP 1669
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 290 CWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 445
C T +S + P T T +T T +++ + TPS+T GT PP
Sbjct: 2845 CPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPP 2896
>BC130422-1|AAI30423.1| 2210|Homo sapiens mediator complex subunit
13-like protein.
Length = 2210
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 RQTSXKVSWKFTPV-LENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHH 426
RQT VSW + V +NN + + + ++ +DN G D + +T ++ H
Sbjct: 1251 RQTLPCVSWSYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHS 1310
Query: 427 WYLEPSMYES 456
L+ SM S
Sbjct: 1311 NVLDISMLSS 1320
>BC126135-1|AAI26136.1| 173|Homo sapiens calcium binding protein 5
protein.
Length = 173
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 184 PFVYELXSLLGEDHSKLDGKVRFDDFLSILCP*LVGEVHGV 62
P EL L + L G+V FDDF+ ++ P L+ E G+
Sbjct: 64 PTEMELIELGQQIRMNLGGRVDFDDFVELMTPKLLAETAGM 104
>BC126133-1|AAI26134.1| 173|Homo sapiens calcium binding protein 5
protein.
Length = 173
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 184 PFVYELXSLLGEDHSKLDGKVRFDDFLSILCP*LVGEVHGV 62
P EL L + L G+V FDDF+ ++ P L+ E G+
Sbjct: 64 PTEMELIELGQQIRMNLGGRVDFDDFVELMTPKLLAETAGM 104
>AY338463-1|AAR08418.1| 2210|Homo sapiens thyroid hormone
receptor-associated protein complex 240 kDa
component-like protein.
Length = 2210
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 RQTSXKVSWKFTPV-LENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHH 426
RQT VSW + V +NN + + + ++ +DN G D + +T ++ H
Sbjct: 1251 RQTLPCVSWSYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHS 1310
Query: 427 WYLEPSMYES 456
L+ SM S
Sbjct: 1311 NVLDISMLSS 1320
>AL133033-1|CAB61363.1| 1908|Homo sapiens hypothetical protein
protein.
Length = 1908
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 RQTSXKVSWKFTPV-LENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHH 426
RQT VSW + V +NN + + + ++ +DN G D + +T ++ H
Sbjct: 949 RQTLPCVSWSYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHS 1008
Query: 427 WYLEPSMYES 456
L+ SM S
Sbjct: 1009 NVLDISMLSS 1018
>AK023837-1|BAB14697.1| 1111|Homo sapiens nent TRAP240 mRNA.
protein.
Length = 1111
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 RQTSXKVSWKFTPV-LENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHH 426
RQT VSW + V +NN + + + ++ +DN G D + +T ++ H
Sbjct: 152 RQTLPCVSWSYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHS 211
Query: 427 WYLEPSMYES 456
L+ SM S
Sbjct: 212 NVLDISMLSS 221
>AF515599-1|AAQ08182.1| 2210|Homo sapiens PROSIT240 protein.
Length = 2210
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 RQTSXKVSWKFTPV-LENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHH 426
RQT VSW + V +NN + + + ++ +DN G D + +T ++ H
Sbjct: 1251 RQTLPCVSWSYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHS 1310
Query: 427 WYLEPSMYES 456
L+ SM S
Sbjct: 1311 NVLDISMLSS 1320
>AF170815-1|AAF25798.1| 173|Homo sapiens CaBP5 protein.
Length = 173
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 184 PFVYELXSLLGEDHSKLDGKVRFDDFLSILCP*LVGEVHGV 62
P EL L + L G+V FDDF+ ++ P L+ E G+
Sbjct: 64 PTEMELIELGQQIRMNLGGRVDFDDFVELMTPKLLAETAGM 104
>AF169159-1|AAF25793.1| 173|Homo sapiens CaBP5 protein.
Length = 173
Score = 30.3 bits (65), Expect = 3.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 184 PFVYELXSLLGEDHSKLDGKVRFDDFLSILCP*LVGEVHGV 62
P EL L + L G+V FDDF+ ++ P L+ E G+
Sbjct: 64 PTEMELIELGQQIRMNLGGRVDFDDFVELMTPKLLAETAGM 104
>AB028948-1|BAA82977.2| 1917|Homo sapiens KIAA1025 protein protein.
Length = 1917
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 RQTSXKVSWKFTPV-LENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHH 426
RQT VSW + V +NN + + + ++ +DN G D + +T ++ H
Sbjct: 958 RQTLPCVSWSYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHS 1017
Query: 427 WYLEPSMYES 456
L+ SM S
Sbjct: 1018 NVLDISMLSS 1027
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 290 CWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 445
C T +S + P T T +T T +++ + TPS+T GT PP
Sbjct: 59 CPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPP 110
>AF253321-1|AAF64523.1| 716|Homo sapiens cervical mucin MUC5B
protein.
Length = 716
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 290 CWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 445
C T +S + P T T +T T +++ + TPS+T GT PP
Sbjct: 319 CPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTAPPP 370
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,826,688
Number of Sequences: 237096
Number of extensions: 1355409
Number of successful extensions: 3309
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3300
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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