Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20282
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 33 0.086
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 32 0.26
AL008867-2|CAE17750.1| 763|Caenorhabditis elegans Hypothetical ... 30 1.1
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical ... 28 3.2
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81486-9|CAB03991.1| 430|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z66522-1|CAA91406.3| 425|Caenorhabditis elegans Hypothetical pr... 27 5.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 5.7
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 27 7.5
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 7.5
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 7.5
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 27 7.5
U58764-5|AAB00727.1| 146|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 27 7.5
AF067946-1|AAC17686.3| 275|Caenorhabditis elegans Hypothetical ... 27 7.5
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 27 9.9
U80842-11|AAB37941.2| 231|Caenorhabditis elegans Hypothetical p... 27 9.9
L15314-1|AAF99984.2| 728|Caenorhabditis elegans Anaphase promot... 27 9.9
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 33.5 bits (73), Expect = 0.086
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 278 SLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 427
++P TT S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 421 AIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 470
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 296 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 445
KTT FT+ P P T ST +S T V + S+T TP T T + P
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTSTTTEP 484
>AL008867-2|CAE17750.1| 763|Caenorhabditis elegans Hypothetical
protein C46E1.3 protein.
Length = 763
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/95 (26%), Positives = 37/95 (38%)
Frame = +2
Query: 161 TVKLINKRDHHALKLIDQQNHNKIAFGDSKDKPAXKSPGSLPPCWKTTEFTSRSCPPRTN 340
TV RD H+L+ ++ I G S+ + P S PP S PP+
Sbjct: 47 TVPPPTPRDTHSLRSFIEET--PILLGSSEHSGSSSPPRSSPP--PPPSIPPPSDPPKDG 102
Query: 341 ST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 445
TRK+ +V + +PL P +PP
Sbjct: 103 IFHHEDTRKIFGSSVLTRGASPLPPKPDESHYAPP 137
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 299 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 427
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical
protein T11G6.4 protein.
Length = 499
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 283 TPVL-ENNRVYFKIMSTEDKQYLKLDNTKGS-SDDRIIYGDSTADTFKHH 426
TPVL + R K+ + EDK L D+ S S+D ++ D T KHH
Sbjct: 444 TPVLIKEKRKRHKLKAREDKALLNSDSDSNSDSEDDLLLNDQTTRR-KHH 492
>AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical
protein Y106G6G.4 protein.
Length = 315
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 311 TSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLS 439
TS PP TNS+ S++ V+ ++S+ + L + T TL+
Sbjct: 223 TSTDPPPTTNSSNSTVESVTSVIPINSSTVPVLNTTLQTSTLA 265
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 KDKPAXKSPGSLPPCWKTTE--FTSRSCPPRTNST*SSITRKVLVMTVSSTVIA 403
K +P P ++P CW+ F PPR N+T I K + V+A
Sbjct: 419 KTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 56 KRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQTVKLINKRDHHALKLI 208
K+N +D WT+ E +KSY F + R FTE K N+++ + + LI
Sbjct: 210 KKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE-LQKRWNRKNEYIISLI 261
>Z81486-9|CAB03991.1| 430|Caenorhabditis elegans Hypothetical
protein C53A5.11 protein.
Length = 430
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 375 TRTFRVIELQVLFVLGGHDLEVNSVVFQHGGKLPGDFXAGLSLESPNA 232
TRT I ++ +GG+D S V + K GD+ G SL + A
Sbjct: 249 TRTSACIHEDAIYAVGGYDATYMSSVEIYDIKTGGDWTTGPSLNNRRA 296
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 339 FVLGGHDLEVNSVVFQHGGKLP 274
F L GH+ VN V + HGG+ P
Sbjct: 179 FTLEGHEKGVNCVDYYHGGEKP 200
>Z66522-1|CAA91406.3| 425|Caenorhabditis elegans Hypothetical
protein F14E5.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 17 VIKEAXKRXIENGKRNTMDFAYQLWTKDGKEIVKSYF 127
V+ + E NTM +LW K+GK IVK Y+
Sbjct: 336 VLDHIQSKSKEEPNYNTM-IIMELWKKNGKPIVKFYY 371
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 149 FTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKDKPAXKSPGSLPPCWKTTEFTS 316
F+ KL KR L DQ+ H ++ S PA S PPC ++ TS
Sbjct: 619 FSSLRQKLSFKRRQSPLAAGDQRAHPEVEQPVSSSSPATPSISGPPPCATSSGSTS 674
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 326 PPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTG 430
PP TN + + + +S++V A L PS+T G
Sbjct: 339 PPATNGQVAGLAAHAQLSALSASVAATLPPSDTAG 373
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 269 SPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 436
SP S PP ++ TSRSC P + +I + PLTPS T L
Sbjct: 39 SPVS-PPTANSSSSTSRSCSPVVRA--ETIVAGKWTHISGKVSVRPLTPSETESVL 91
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 269 SPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 436
SP S PP ++ TSRSC P + +I + PLTPS T L
Sbjct: 39 SPVS-PPTANSSSSTSRSCSPVVRA--ETIVAGKWTHISGKVSVRPLTPSETESVL 91
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 269 SPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 436
SP S PP ++ TSRSC P + +I + PLTPS T L
Sbjct: 39 SPVS-PPTANSSSSTSRSCSPVVRA--ETIVAGKWTHISGKVSVRPLTPSETESVL 91
>U58764-5|AAB00727.1| 146|Caenorhabditis elegans Hypothetical
protein M03E7.1 protein.
Length = 146
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 334 DKQYLKLDNTK-GSSDDRIIYGDSTADTFKH 423
DK + L K G D R+ + DST T KH
Sbjct: 104 DKLIISLKEAKKGDKDPRVTFNDSTHTTHKH 134
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 299 TTEFTSRSCPPRTNST*SSITRKV--LVMTVSSTVIAPLTPSNTTGTLS 439
TT T+ + P T ST + T V T+S+T TP+ TT T S
Sbjct: 269 TTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTTTTTTS 317
>AF067946-1|AAC17686.3| 275|Caenorhabditis elegans Hypothetical
protein W02G9.5 protein.
Length = 275
Score = 27.1 bits (57), Expect = 7.5
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 212 QQNHNKIAFGDSKDKPAXKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVM-TVS 388
QQ KI G S+D K L CW TE SRS P+ +S + + VL T++
Sbjct: 29 QQTFKKINDGFSRDCKDFKR---LVRCWNRTEAQSRSKIPKISSKFTICSYNVLCQKTIA 85
Query: 389 ST 394
T
Sbjct: 86 RT 87
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical
protein F19H8.5 protein.
Length = 514
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 383 VSSTVIAPLTPSNTTGTLSP 442
+ S IAPL PSN+ G LSP
Sbjct: 159 ILSPRIAPLMPSNSKGLLSP 178
>U80842-11|AAB37941.2| 231|Caenorhabditis elegans Hypothetical
protein ZC239.4 protein.
Length = 231
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +1
Query: 277 KFTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHHWYLEPSMYES 456
K P+LENN + +++ ++K L + +S D S D F + ++E ++
Sbjct: 113 KRLPILENNSQFLQVLCNQEKPILLI--VVMASRDHFFPNMSIPDGFNAYKFVEKYSHQF 170
Query: 457 DVMF 468
+ F
Sbjct: 171 HIYF 174
>L15314-1|AAF99984.2| 728|Caenorhabditis elegans Anaphase promoting
complex; seealso mat protein 2 protein.
Length = 728
Score = 26.6 bits (56), Expect = 9.9
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +2
Query: 80 YQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALK----LIDQQNHN-KIAFGD 244
+Q+ +K+ E++ FP++FR + T + L+ +H + LIDQ N +A D
Sbjct: 223 FQMLSKNAYEMIAVDFPVKFRSLITMKYC-LLRTNNHGRVDFTNYLIDQVNTKLLVASVD 281
Query: 245 SKD 253
+KD
Sbjct: 282 TKD 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,498,674
Number of Sequences: 27780
Number of extensions: 210163
Number of successful extensions: 801
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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