Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20281
         (418 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   1.9  
AF457561-1|AAL68791.1|   46|Anopheles gambiae hypothetical prote...    22   7.8  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = -2

Query: 204 NLASKNLNTVNNSXLNEVKSNFSKDKFYYTTTXKINPGN*YITPPNLNKTNS 49
           N  S N    N+S LN   S  +      TTT   NPGN      N N +NS
Sbjct: 116 NSGSSNAALSNSSVLNGSNSGSATT----TTTTPTNPGNGNGGSNNNNNSNS 163


>AF457561-1|AAL68791.1|   46|Anopheles gambiae hypothetical
          protein 14 protein.
          Length = 46

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 1  PLNYCSLNLTH 33
          PL+YC L LTH
Sbjct: 2  PLSYCHLFLTH 12


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,605
Number of Sequences: 2352
Number of extensions: 4650
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)