Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20281
         (418 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069550-1|AAL39695.1|  535|Drosophila melanogaster LD27564p pro...    27   10.0 
AE014297-4249|AAF56802.2|  535|Drosophila melanogaster CG9986-PA...    27   10.0 

>AY069550-1|AAL39695.1|  535|Drosophila melanogaster LD27564p
           protein.
          Length = 535

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 231 YAKINPTLTNLASKNLNTVNNSXLNEVKSNFSKDKFYYTTTXKIN 97
           YAK+   +T+L    + T+NNS   E+ S  ++     TT+  IN
Sbjct: 151 YAKVVSDMTDLMDSEVETLNNSQQQEMDSQINQLDI-TTTSEDIN 194


>AE014297-4249|AAF56802.2|  535|Drosophila melanogaster CG9986-PA
           protein.
          Length = 535

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 231 YAKINPTLTNLASKNLNTVNNSXLNEVKSNFSKDKFYYTTTXKIN 97
           YAK+   +T+L    + T+NNS   E+ S  ++     TT+  IN
Sbjct: 151 YAKVVSDMTDLMDSEVETLNNSQQQEMDSQINQLDI-TTTSEDIN 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,645,482
Number of Sequences: 53049
Number of extensions: 193078
Number of successful extensions: 376
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)