Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20275
(503 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 167 3e-42
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 167 5e-42
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 167 6e-42
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 165 2e-41
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 4e-41
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 9e-40
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 1e-39
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 2e-39
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 131 3e-31
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 130 5e-31
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 1e-30
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 128 2e-30
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 122 2e-28
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 2e-24
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 4e-23
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 93 2e-19
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 91 4e-19
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 91 5e-19
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 91 6e-19
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 88 4e-18
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 75 3e-14
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 45 3e-05
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 40 9e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.13
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 29 2.2
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 3.8
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 28 3.8
SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1) 27 8.8
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 27 8.8
SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 27 8.8
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 167 bits (407), Expect = 3e-42
Identities = 80/90 (88%), Positives = 81/90 (90%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 113 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
TIGKEIVDLVLDRIRKLADQ TGLQGFLIF
Sbjct: 173 TIGKEIVDLVLDRIRKLADQCTGLQGFLIF 202
Score = 166 bits (403), Expect = 1e-41
Identities = 77/90 (85%), Positives = 81/90 (90%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 634 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE++DLVLDRIRKLADQ TGLQGFLIF
Sbjct: 694 TVGKELIDLVLDRIRKLADQCTGLQGFLIF 723
Score = 132 bits (320), Expect = 1e-31
Identities = 58/65 (89%), Positives = 59/65 (90%)
Frame = +3
Query: 75 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 254
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 255 ASTYP 269
P
Sbjct: 123 GKHVP 127
Score = 132 bits (318), Expect = 2e-31
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 261 TYP 269
P
Sbjct: 646 HVP 648
Score = 131 bits (317), Expect = 3e-31
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 264 YP 269
P
Sbjct: 574 VP 575
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTV 301
F F + KHVPRAVFVDLEPTV
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPTV 586
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 167 bits (406), Expect = 5e-42
Identities = 79/90 (87%), Positives = 81/90 (90%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 482 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKEIVDLVLDRIRKLADQ TGLQGFLIF
Sbjct: 542 TVGKEIVDLVLDRIRKLADQCTGLQGFLIF 571
Score = 167 bits (405), Expect = 6e-42
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKEIVDLVLDRIRKLADQ TGLQGFLIF
Sbjct: 109 TVGKEIVDLVLDRIRKLADQCTGLQGFLIF 138
Score = 133 bits (322), Expect = 7e-32
Identities = 57/63 (90%), Positives = 59/63 (93%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
Score = 131 bits (317), Expect = 3e-31
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 264 YP 269
P
Sbjct: 495 VP 496
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 167 bits (405), Expect = 6e-42
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKEI+DLVLDRIRKLADQ TGLQGFLIF
Sbjct: 108 TVGKEIIDLVLDRIRKLADQCTGLQGFLIF 137
Score = 131 bits (317), Expect = 3e-31
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 264 YP 269
P
Sbjct: 61 VP 62
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 165 bits (401), Expect = 2e-41
Identities = 78/90 (86%), Positives = 80/90 (88%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
TIGKEI+DLVLDR RKLADQ TGLQGFLIF
Sbjct: 109 TIGKEIIDLVLDRCRKLADQCTGLQGFLIF 138
Score = 132 bits (319), Expect = 2e-31
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 164 bits (398), Expect = 4e-41
Identities = 76/90 (84%), Positives = 80/90 (88%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 853 FNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE++DLVLDRIRKLADQ TGLQGFLIF
Sbjct: 913 TVGKEMIDLVLDRIRKLADQCTGLQGFLIF 942
Score = 159 bits (385), Expect = 2e-39
Identities = 73/90 (81%), Positives = 79/90 (87%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 420 FNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 479
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE +D+VLDR+RKLAD TGLQGFLIF
Sbjct: 480 TVGKEQIDIVLDRLRKLADGCTGLQGFLIF 509
Score = 130 bits (315), Expect = 5e-31
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 264 YP 269
P
Sbjct: 866 VP 867
Score = 129 bits (311), Expect = 1e-30
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGA
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 264 YP 269
P
Sbjct: 433 VP 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 159 bits (387), Expect = 9e-40
Identities = 72/90 (80%), Positives = 80/90 (88%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GK+++++VLDR+RKLADQ TGLQGFLIF
Sbjct: 94 TVGKQLIEIVLDRLRKLADQCTGLQGFLIF 123
Score = 155 bits (377), Expect = 1e-38
Identities = 70/90 (77%), Positives = 79/90 (87%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 467 FNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GK+ +D VLDRIRKLADQ +GLQGFL+F
Sbjct: 527 TVGKDHIDNVLDRIRKLADQCSGLQGFLVF 556
Score = 130 bits (313), Expect = 8e-31
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 264 YP 269
P
Sbjct: 480 VP 481
Score = 101 bits (242), Expect = 3e-22
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = +3
Query: 126 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYP 269
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 48
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 159 bits (386), Expect = 1e-39
Identities = 74/90 (82%), Positives = 78/90 (86%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F S KHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE++D VLDR+RKLAD TGLQGFLIF
Sbjct: 109 TVGKEMIDTVLDRLRKLADGCTGLQGFLIF 138
Score = 131 bits (317), Expect = 3e-31
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 159 bits (385), Expect = 2e-39
Identities = 72/90 (80%), Positives = 79/90 (87%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHY
Sbjct: 14 FNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHY 73
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE +DL LDRIRKLADQ TGLQGFLIF
Sbjct: 74 TVGKEHIDLALDRIRKLADQCTGLQGFLIF 103
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +3
Query: 186 MPTDKTIGGGDDSFNTFFSETGAASTYP 269
MP+DKTIGGGDDSFNTFF+ETGA P
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVP 28
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 142 bits (343), Expect = 2e-34
Identities = 62/79 (78%), Positives = 74/79 (93%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE+V++V+
Sbjct: 971 KYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVM 1030
Query: 437 DRIRKLADQXTGLQGFLIF 493
D+IRK+ DQ +GLQGFLIF
Sbjct: 1031 DKIRKMTDQCSGLQGFLIF 1049
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 131 bits (317), Expect = 3e-31
Identities = 59/65 (90%), Positives = 63/65 (96%)
Frame = +2
Query: 299 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQXTGLQ 478
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQ TGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 479 GFLIF 493
GFLIF
Sbjct: 71 GFLIF 75
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 130 bits (315), Expect = 5e-31
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
Score = 116 bits (279), Expect = 1e-26
Identities = 61/90 (67%), Positives = 65/90 (72%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
TIGK+ VD VLDR+RKLADQ +GLQGF IF
Sbjct: 99 TIGKQQVDQVLDRLRKLADQCSGLQGFFIF 128
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 129 bits (312), Expect = 1e-30
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVR 316
F F KHVPRAVFVDLEP+VV ++
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 128 bits (310), Expect = 2e-30
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +2
Query: 308 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQXTGLQGFL 487
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQ TGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 488 IF 493
IF
Sbjct: 62 IF 63
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 122 bits (294), Expect = 2e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +2
Query: 308 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQXTGLQGFL 487
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIRKLADQ TGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 488 IF 493
IF
Sbjct: 62 IF 63
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 108 bits (260), Expect = 2e-24
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 254
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETAS 253
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 449 KLADQXTGLQGFLIF 493
K ADQ TGLQGFL+F
Sbjct: 255 KHADQCTGLQGFLVF 269
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 104 bits (250), Expect = 4e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +2
Query: 308 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 454
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +2
Query: 308 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 454
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +DL L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 91.5 bits (217), Expect = 4e-19
Identities = 41/76 (53%), Positives = 54/76 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Query: 437 DRIRKLADQXTGLQGF 484
D +RK A+ LQGF
Sbjct: 331 DVVRKEAESCDCLQGF 346
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +3
Query: 66 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 245
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 246 TGAASTYP 269
P
Sbjct: 267 ATGGKYVP 274
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 91.1 bits (216), Expect = 5e-19
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 117
Query: 437 DRIRKLADQXTGLQGF 484
D +RK A+ LQGF
Sbjct: 118 DVVRKEAESCDCLQGF 133
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 90.6 bits (215), Expect = 6e-19
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 3 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 62
Query: 437 DRIRKLADQXTGLQGF 484
D +RK A+ +QGF
Sbjct: 63 DVVRKEAESCDCIQGF 78
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 87.8 bits (208), Expect = 4e-18
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 KYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVL 117
Query: 437 DRIRKLADQXTGLQGF 484
D +RK A+ +QGF
Sbjct: 118 DVVRKEAESCDCIQGF 133
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 75.4 bits (177), Expect = 3e-14
Identities = 31/75 (41%), Positives = 49/75 (65%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D +
Sbjct: 14 RYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIF 73
Query: 437 DRIRKLADQXTGLQG 481
D +RK A+ +QG
Sbjct: 74 DVLRKEAENCDCMQG 88
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 358
K+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 365 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQXTGLQGFLI 490
+ AANN+A+G YT G E++D +D IRKLA+ +QGF I
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQI 43
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 40.3 bits (90), Expect = 9e-04
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +2
Query: 269 RAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 433
RAV +D+E V+ + ++GT+R + Q + K + NN+A G G + +D V
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKV 124
Query: 434 LDRIRKLADQXTGLQGFL 487
LD +++ ++ L GFL
Sbjct: 125 LDLVQREVEKCDRLDGFL 142
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 269 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 388
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 266 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 415
P V+ L T VD+V+TG PEQL+ K++A+ RG + + K
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHK 171
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 141 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 245
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 216 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 106
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 310 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 420
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 455 ADQXTGLQGFLIF 493
ADQ TGLQGFLIF
Sbjct: 1 ADQCTGLQGFLIF 13
>SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1)
Length = 1141
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 142 GSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELQA 261
GS A + +S ARC + P G + +SA P+ QA
Sbjct: 956 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPDKQA 995
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 142 GSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELQA 261
GS A + +S ARC + P G + +SA P+ QA
Sbjct: 1142 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPDKQA 1181
>SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05)
Length = 799
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -2
Query: 274 STGYVLAAPVSLKKVLKESSPP-----PMVLSVGIWPSGW 170
+TGY P LK V E SP V+S +WPS W
Sbjct: 755 ATGYDNIPPRFLKPVANEISPSLTRIFNRVISDSVWPSDW 794
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,555,201
Number of Sequences: 59808
Number of extensions: 354620
Number of successful extensions: 907
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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