Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20275
(503 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 157 6e-39
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 157 6e-39
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 157 6e-39
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 157 6e-39
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 148 3e-36
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 148 3e-36
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 146 6e-36
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 146 6e-36
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 146 6e-36
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 145 1e-35
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 143 7e-35
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 143 7e-35
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 139 1e-33
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 137 5e-33
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 137 5e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 92 2e-19
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 92 2e-19
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 91 3e-19
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 91 3e-19
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 91 4e-19
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 89 1e-18
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 79 2e-15
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 79 2e-15
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 48 4e-06
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 48 4e-06
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 3.3
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 4.4
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 4.4
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 4.4
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 4.4
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 4.4
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 4.4
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 4.4
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 4.4
AF022984-8|AAB69957.1| 156|Caenorhabditis elegans Prion-like-(q... 27 7.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 157 bits (380), Expect = 6e-39
Identities = 71/90 (78%), Positives = 77/90 (85%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
TIGKEI+DL LDRIR+LAD TGLQGFL+F
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVF 138
Score = 120 bits (290), Expect = 5e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 157 bits (380), Expect = 6e-39
Identities = 71/90 (78%), Positives = 77/90 (85%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
TIGKEI+DL LDRIR+LAD TGLQGFL+F
Sbjct: 108 TIGKEIIDLTLDRIRRLADNCTGLQGFLVF 137
Score = 118 bits (285), Expect = 2e-27
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 264 YP 269
P
Sbjct: 61 VP 62
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 157 bits (380), Expect = 6e-39
Identities = 71/90 (78%), Positives = 77/90 (85%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
TIGKEI+DL LDRIR+LAD TGLQGFL+F
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVF 138
Score = 120 bits (290), Expect = 5e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 157 bits (380), Expect = 6e-39
Identities = 71/90 (78%), Positives = 77/90 (85%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
TIGKEI+DL LDRIR+LAD TGLQGFL+F
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVF 138
Score = 120 bits (290), Expect = 5e-28
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 148 bits (358), Expect = 3e-36
Identities = 64/90 (71%), Positives = 78/90 (86%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE++D VLDRIR+LAD +GLQGF +F
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVF 136
Score = 101 bits (242), Expect = 3e-22
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 148 bits (358), Expect = 3e-36
Identities = 64/90 (71%), Positives = 78/90 (86%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE++D VLDRIR+LAD +GLQGF +F
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVF 136
Score = 101 bits (242), Expect = 3e-22
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 146 bits (355), Expect = 6e-36
Identities = 63/90 (70%), Positives = 78/90 (86%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE++D VLDRIR+LAD +GLQGF +F
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVF 136
Score = 100 bits (239), Expect = 7e-22
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 146 bits (355), Expect = 6e-36
Identities = 64/90 (71%), Positives = 77/90 (85%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
+ F S KHVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
TIGKE++D+V+DR+R+L ++ LQGFLIF
Sbjct: 109 TIGKELIDVVMDRVRRLTERCQSLQGFLIF 138
Score = 101 bits (243), Expect = 2e-22
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 146 bits (355), Expect = 6e-36
Identities = 63/90 (70%), Positives = 78/90 (86%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE++D VLDRIR+LAD +GLQGF +F
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVF 136
Score = 100 bits (239), Expect = 7e-22
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 145 bits (352), Expect = 1e-35
Identities = 62/90 (68%), Positives = 75/90 (83%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
TIGKEI+D+V+DR+R+L + GLQGFL+F
Sbjct: 114 TIGKEIIDVVMDRVRRLVENCRGLQGFLVF 143
Score = 102 bits (244), Expect = 2e-22
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +3
Query: 78 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAA 257
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET A
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 258 STYP 269
P
Sbjct: 65 KHVP 68
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 143 bits (346), Expect = 7e-35
Identities = 61/90 (67%), Positives = 76/90 (84%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE++D LDRIR+LAD +GLQGF +F
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVF 136
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 143 bits (346), Expect = 7e-35
Identities = 61/90 (67%), Positives = 76/90 (84%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 403
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
T+GKE++D LDRIR+LAD +GLQGF +F
Sbjct: 107 TVGKELIDTTLDRIRRLADNCSGLQGFFVF 136
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/63 (71%), Positives = 50/63 (79%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 142 bits (343), Expect = 2e-34
Identities = 59/79 (74%), Positives = 72/79 (91%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D L
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTL 116
Query: 437 DRIRKLADQXTGLQGFLIF 493
DRIR+LA+ GLQGF +F
Sbjct: 117 DRIRRLANNCEGLQGFFVF 135
Score = 86.2 bits (204), Expect = 1e-17
Identities = 41/63 (65%), Positives = 43/63 (68%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 261 TYP 269
P
Sbjct: 58 HVP 60
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 139 bits (336), Expect = 1e-33
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = +2
Query: 227 QHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 406
Q F + KHVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 407 IGKEIVDLVLDRIRKLADQXTGLQGFLIF 493
IGKE++D+VLDRIRK + GLQGFL+F
Sbjct: 113 IGKELIDVVLDRIRKQTENCEGLQGFLVF 141
Score = 71.3 bits (167), Expect = 4e-13
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSET 248
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSES 59
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 137 bits (331), Expect = 5e-33
Identities = 59/79 (74%), Positives = 72/79 (91%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+
Sbjct: 66 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVM 125
Query: 437 DRIRKLADQXTGLQGFLIF 493
DR+++LA+ GLQGF+IF
Sbjct: 126 DRVKRLAENCNGLQGFVIF 144
Score = 89.4 bits (212), Expect = 1e-18
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 264 YP 269
P
Sbjct: 68 VP 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 137 bits (331), Expect = 5e-33
Identities = 59/79 (74%), Positives = 72/79 (91%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+
Sbjct: 38 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVM 97
Query: 437 DRIRKLADQXTGLQGFLIF 493
DR+++LA+ GLQGF+IF
Sbjct: 98 DRVKRLAENCNGLQGFVIF 116
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +3
Query: 147 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYP 269
++CLEHGIQPDG D T ++ NTFF+ET P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVP 41
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 91.9 bits (218), Expect = 2e-19
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2
Query: 251 SCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 430
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 431 VLDRIRKLADQXTGLQGF 484
VLD +RK A+ LQGF
Sbjct: 116 VLDVVRKEAESTDCLQGF 133
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 91.9 bits (218), Expect = 2e-19
Identities = 43/78 (55%), Positives = 55/78 (70%)
Frame = +2
Query: 251 SCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 430
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 431 VLDRIRKLADQXTGLQGF 484
VLD +RK A+ LQGF
Sbjct: 116 VLDVVRKEAESTDCLQGF 133
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 91.5 bits (217), Expect = 3e-19
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 437 DRIRKLADQXTGLQGF 484
D IRK A+ LQGF
Sbjct: 118 DVIRKEAEGCDCLQGF 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 182
MRE + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 91.5 bits (217), Expect = 3e-19
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 437 DRIRKLADQXTGLQGF 484
D IRK A+ LQGF
Sbjct: 118 DVIRKEAEGCDCLQGF 133
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 182
MRE + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 91.1 bits (216), Expect = 4e-19
Identities = 42/76 (55%), Positives = 54/76 (71%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 437 DRIRKLADQXTGLQGF 484
D +RK A+ LQGF
Sbjct: 118 DVVRKEAEGCDCLQGF 133
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 89.4 bits (212), Expect = 1e-18
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 58 KYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 437 DRIRKLADQXTGLQGF 484
D +RK A+ LQGF
Sbjct: 118 DVVRKEAESCDCLQGF 133
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 79.0 bits (186), Expect = 2e-15
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 437 DRIRKLADQXTGLQGF 484
IR+ A+ L+GF
Sbjct: 118 SVIRREAEAADSLEGF 133
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 197
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 79.0 bits (186), Expect = 2e-15
Identities = 36/76 (47%), Positives = 52/76 (68%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 436
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 437 DRIRKLADQXTGLQGF 484
IR+ A+ L+GF
Sbjct: 118 SVIRREAEAADSLEGF 133
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 197
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 48.0 bits (109), Expect = 4e-06
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHY 403
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIFTPS 502
G+E+ + ++D I + A+ L G ++FT S
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDG-ILFTHS 142
Score = 34.7 bits (76), Expect = 0.039
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 93 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 185
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 48.0 bits (109), Expect = 4e-06
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHY 403
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 404 TIGKEIVDLVLDRIRKLADQXTGLQGFLIFTPS 502
G+E+ + ++D I + A+ L G ++FT S
Sbjct: 111 CQGQEVQEKIMDIIIREAENTNNLDG-ILFTHS 142
Score = 34.7 bits (76), Expect = 0.039
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 93 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 185
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 370 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 275
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 442
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 442
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 442
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 442
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 442
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 442
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 442
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 299 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 442
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>AF022984-8|AAB69957.1| 156|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 97
protein.
Length = 156
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 499 RSEDQESLQTGTLVSELADSVQNQINDFLSN 407
+ E Q S T ++S+L+ SVQNQ+ L+N
Sbjct: 86 QQEQQMSQNTSQIISQLS-SVQNQLESILNN 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,996,030
Number of Sequences: 27780
Number of extensions: 255762
Number of successful extensions: 682
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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