Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20271
         (317 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB...    28   2.3  
BT009925-1|AAQ21582.1|  516|Drosophila melanogaster LD20463p pro...    27   6.9  
AE013599-1619|AAO41397.1|  516|Drosophila melanogaster CG13320-P...    27   6.9  
AE013599-1618|AAF58438.1|  516|Drosophila melanogaster CG13320-P...    27   6.9  

>AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB
           protein.
          Length = 1003

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 114 SASTSSVLGASVALEASAHTAR 49
           +A+  S+LGA+ AL+ASAH  R
Sbjct: 260 AAAVESLLGAAAALQASAHVQR 281


>BT009925-1|AAQ21582.1|  516|Drosophila melanogaster LD20463p
           protein.
          Length = 516

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +2

Query: 131 DXIXEYETXIAKCSEYLKEKKGEVIKEAVKRLIENGXRNTMASPTSYGQRMERKSSNXTS 310
           D I  Y        E  ++KK + +KE  ++  E   R  M       QR + + S+ ++
Sbjct: 112 DEILRYLDVAFTNFEATEKKKSKALKELAEKNCEKRVREYMKRQNQQQQRQDPEYSDLSA 171

Query: 311 PS 316
           PS
Sbjct: 172 PS 173


>AE013599-1619|AAO41397.1|  516|Drosophila melanogaster CG13320-PB,
           isoform B protein.
          Length = 516

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +2

Query: 131 DXIXEYETXIAKCSEYLKEKKGEVIKEAVKRLIENGXRNTMASPTSYGQRMERKSSNXTS 310
           D I  Y        E  ++KK + +KE  ++  E   R  M       QR + + S+ ++
Sbjct: 112 DEILRYLDVAFTNFEATEKKKSKALKELAEKNCEKRVREYMKRQNQQQQRQDPEYSDLSA 171

Query: 311 PS 316
           PS
Sbjct: 172 PS 173


>AE013599-1618|AAF58438.1|  516|Drosophila melanogaster CG13320-PA,
           isoform A protein.
          Length = 516

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +2

Query: 131 DXIXEYETXIAKCSEYLKEKKGEVIKEAVKRLIENGXRNTMASPTSYGQRMERKSSNXTS 310
           D I  Y        E  ++KK + +KE  ++  E   R  M       QR + + S+ ++
Sbjct: 112 DEILRYLDVAFTNFEATEKKKSKALKELAEKNCEKRVREYMKRQNQQQQRQDPEYSDLSA 171

Query: 311 PS 316
           PS
Sbjct: 172 PS 173


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,545,290
Number of Sequences: 53049
Number of extensions: 220498
Number of successful extensions: 831
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)