Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20271
(317 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g27580.1 68417.m03961 expressed protein 31 0.22
At1g62250.2 68414.m07023 expressed protein 30 0.39
At1g62250.1 68414.m07022 expressed protein 30 0.39
At5g51650.1 68418.m06404 hypothetical protein 28 1.2
At1g56660.1 68414.m06516 expressed protein 27 2.7
At5g12420.1 68418.m01460 expressed protein 27 3.6
At2g22990.5 68415.m02735 sinapoylglucose:malate sinapoyltransfer... 27 3.6
At2g22980.1 68415.m02731 serine carboxypeptidase S10 family prot... 26 4.8
At5g61980.1 68418.m07779 ARF GTPase-activating domain-containing... 26 6.3
At5g04820.1 68418.m00504 ovate family protein 62% similar to ova... 26 6.3
At2g22920.2 68415.m02722 serine carboxypeptidase S10 family prot... 26 6.3
At1g53910.1 68414.m06137 AP2 domain-containing protein RAP2.12 (... 26 6.3
At5g28235.1 68418.m03421 Ulp1 protease family protein contains P... 25 8.3
At4g08430.1 68417.m01392 Ulp1 protease family protein similar to... 25 8.3
At3g17170.1 68416.m02190 ribosomal protein S6 family protein (RF... 25 8.3
At2g23190.1 68415.m02770 cytochrome P450, putative Similar to C... 25 8.3
>At4g27580.1 68417.m03961 expressed protein
Length = 104
Score = 30.7 bits (66), Expect = 0.22
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 89 PRTDDVLAEQLYMSDXIXEYETXIAKCSEYL-KEKKGEVIKEAVKR--LIENGXRNTMAS 259
P+ D++ + + + E + + L +EKK E I+E K E+ T A
Sbjct: 8 PKESDIVEGSVSTENAVVESKNAATETDATLTQEKKEESIEETKKEGETKEDSSEATKAE 67
Query: 260 PTSYGQRMERKSSNXTSP 313
PT + E K+S+ T P
Sbjct: 68 PTPEAVKAEEKTSSETEP 85
>At1g62250.2 68414.m07023 expressed protein
Length = 223
Score = 29.9 bits (64), Expect = 0.39
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 33 LCLPSSSPCVRWLLTPHLHQELMTYWRSSC 122
LC P + +RW TP + E+++ WR C
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFC 209
>At1g62250.1 68414.m07022 expressed protein
Length = 267
Score = 29.9 bits (64), Expect = 0.39
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 33 LCLPSSSPCVRWLLTPHLHQELMTYWRSSC 122
LC P + +RW TP + E+++ WR C
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFC 209
>At5g51650.1 68418.m06404 hypothetical protein
Length = 206
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 175 ISEGKEGRGYQGSREASDRKRXEEHHGFAYQLWTKDGKEIVKXYFPI 315
+ E KEG QG E ++ E+ A+ W KDG V + I
Sbjct: 38 VQERKEGLEAQGKEEGVEKVLVEKEKEEAHVSWEKDGSVSVAYTYAI 84
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 181 EGKEGRGYQGSREASDRKRXEEHHGFAYQLWTKDGKE 291
+GK+ +G +G E D ++ +EH ++ KD K+
Sbjct: 213 KGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKK 249
>At5g12420.1 68418.m01460 expressed protein
Length = 480
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/67 (25%), Positives = 25/67 (37%)
Frame = -3
Query: 219 FTASLITSPFFSFRYSEHLAIXVSYSXMXSLIYSCSASTSSVLGASVALEASAHTARTKA 40
FT L T P + S+ + +S +L+Y V GA A E R
Sbjct: 338 FTIGLQTDPLVYLKMSKSMMARKKHSYHAALVYFIIKIVLKVFGAKAAAELFDRPVRNTT 397
Query: 39 NKVSLIL 19
VS ++
Sbjct: 398 TCVSNVI 404
>At2g22990.5 68415.m02735 sinapoylglucose:malate sinapoyltransferase
(SNG1) similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]; contains Pfam profile
PF00450: Serine carboxypeptidase; identical to cDNA
sinapoylglucose:malate sinapoyltransferase (SNG1)
GI:8699618
Length = 433
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 75 LEASAHTARTKANKVSLILARWLS 4
++AS HTA + N+ ++ RW+S
Sbjct: 406 IKASGHTAEYRPNETFIMFQRWIS 429
>At2g22980.1 68415.m02731 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) from [Oryza sativa]
Length = 313
Score = 26.2 bits (55), Expect = 4.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 75 LEASAHTARTKANKVSLILARWLS 4
++ S HTA K + S++ RW+S
Sbjct: 286 IKGSGHTAEYKPKETSIMFKRWIS 309
>At5g61980.1 68418.m07779 ARF GTPase-activating domain-containing
protein similar to GCN4-complementing protein (GCP1)
GI:6465806 from [Arabidopsis thaliana]
Length = 850
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 137 IXEYETXIAKCSEYLKEKKGEVIKEAVKRLIENGXRNTMASPTSYGQRMERKSS 298
+ Y +C+ Y E ++E +R ++ RN+ SPT G R ++S
Sbjct: 241 VLAYAHQSRECANYEMASLNERMQE-YQRQVDRETRNSCVSPTGDGMRHNSRNS 293
>At5g04820.1 68418.m00504 ovate family protein 62% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 260
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 277 LSITGRRSHGVPLAVFDQTLHGFLDN 200
L + GR+SHGV ++ F L G D+
Sbjct: 190 LRMNGRKSHGVIVSAFVDLLSGLSDS 215
>At2g22920.2 68415.m02722 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]
Length = 435
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 75 LEASAHTARTKANKVSLILARWLS 4
++ S HTA K N+ ++ RW+S
Sbjct: 408 VKGSGHTAEYKPNETFIMFQRWIS 431
>At1g53910.1 68414.m06137 AP2 domain-containing protein RAP2.12
(RAP2.12) identical to AP2 domain containing protein
GI:2281649 from [Arabidopsis thaliana]
Length = 358
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 184 GKEGRGYQGSREAS-DRKRXEEHHGFAYQLWTKDGKEI 294
GK+ G G E S +RKR ++ G + W K EI
Sbjct: 103 GKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEI 140
>At5g28235.1 68418.m03421 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; simlar to At4g08430, At5g45570
Length = 568
Score = 25.4 bits (53), Expect = 8.3
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 104 VLAEQLYMSDXIXEYETXIAKCSEYLKEKKGEV----IKEAVKRLIENGXRNTMASPTSY 271
V++ + S+ EYE +CS ++EK G V I+ VK+ + N +N A+
Sbjct: 148 VVSNEAATSNNNDEYEANSNQCSWIVEEKPGSVDGLPIQRVVKKTV-NSVKNKEAATKVL 206
Query: 272 GQRMERKS 295
++ KS
Sbjct: 207 TKKKVAKS 214
>At4g08430.1 68417.m01392 Ulp1 protease family protein similar to
At5g45570, At5g28235; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 808
Score = 25.4 bits (53), Expect = 8.3
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 104 VLAEQLYMSDXIXEYETXIAKCSEYLKEKKGEV----IKEAVKRLIENGXRNTMASPTSY 271
V+ + S+ EYE +CS ++EK G V I+ VK+ + N +N A+
Sbjct: 312 VVCNEAATSNNNDEYEANSNQCSWVVEEKSGSVDGLPIQRVVKKAV-NSVKNMEAATKVL 370
Query: 272 GQRMERKS 295
++ KS
Sbjct: 371 TKKKVAKS 378
>At3g17170.1 68416.m02190 ribosomal protein S6 family protein (RFC3)
annotation temporarily based on supporting cDNA
gi|15620809|dbj|AB057424.1|; contains TIGRfam TIGR00166
and Pfam PF01250 profiles ribosomal protein S6.
Length = 314
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 143 EYETXIAKCSEYLKEKKGEV 202
E E+ K +YLKEKKG+V
Sbjct: 136 EVESINQKVQDYLKEKKGKV 155
>At2g23190.1 68415.m02770 cytochrome P450, putative Similar to
Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
Length = 543
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 219 FTASLITSPFFSFRYSEHLAIXVS 148
F+ SL +P FS R HL + VS
Sbjct: 103 FSQSLGDAPIFSLRLGNHLTVVVS 126
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,615,360
Number of Sequences: 28952
Number of extensions: 107832
Number of successful extensions: 388
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 340508912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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