Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20265
         (490 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +3

Query: 309 YNFRLIMAGNFVKLIYRNYNLXLKLGPTLDPANERLAYGDGKEKN 443
           Y   L      V L +  YNL L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +3

Query: 309 YNFRLIMAGNFVKLIYRNYNLXLKLGPTLDPANERLAYGDGKEKN 443
           Y   L      V L +  YNL L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 278 VADPQLVAYSMVFRLP 231
           +++P L  Y+M FR+P
Sbjct: 331 LSNPPLWPYTMYFRMP 346


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 259  TSCGSATDSTLSESTSPITLD 321
            T C     ST++ ST+P+  D
Sbjct: 2282 TECHPDASSTMAPSTTPMVPD 2302


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 482 SHKVMNFPTDEVAVL 438
           S  V NFP+D + +L
Sbjct: 27  SSSVQNFPSDAIKIL 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.130    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,345
Number of Sequences: 336
Number of extensions: 2021
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)