Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20265
         (490 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.4  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   7.4  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   7.4  
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         22   9.8  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         22   9.8  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         22   9.8  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         22   9.8  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    22   9.8  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    22   9.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 240 EHHGVCYKLWVGNGQHIVRKY 302
           + +G C  LW+GN    + KY
Sbjct: 770 QSNGTCASLWLGNAIQTLNKY 790


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 77  TADISATPALTASTHDANTTRN 12
           TAD S++PA ++ TH   T R+
Sbjct: 236 TADPSSSPAYSSITHYEPTARS 257


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +3

Query: 261 KLWVGNG---QHIVRKYFPYNFRLIMAGNFVKLIYR 359
           K+ +GN    +H  R+Y   N    ++G+FV   +R
Sbjct: 426 KINIGNTYAEEHYYRRYLTANLSSDLSGDFVDAFFR 461


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +3

Query: 261 KLWVGNG---QHIVRKYFPYNFRLIMAGNFVKLIYR 359
           K+ +GN    +H  R+Y   N    ++G+FV   +R
Sbjct: 426 KINIGNTYAEEHYYRRYLTANLSSDLSGDFVDAFFR 461


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 222 DH*RKSEHHGVCYKLWVGNGQHIVRKYFPYNFRLIMAGNF 341
           DH      +G C +  VGN QHIV        R I + NF
Sbjct: 119 DHCTNDAFYG-CVR--VGNRQHIVNPVKSARIRTISSFNF 155


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 222 DH*RKSEHHGVCYKLWVGNGQHIVRKYFPYNFRLIMAGNF 341
           DH      +G C +  VGN QHIV        R I + NF
Sbjct: 119 DHCTNDAFYG-CVR--VGNRQHIVNPVKSARIRTISSFNF 155


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 222 DH*RKSEHHGVCYKLWVGNGQHIVRKYFPYNFRLIMAGNF 341
           DH      +G C +  VGN QHIV        R I + NF
Sbjct: 119 DHCTNDAFYG-CVR--VGNRQHIVNPVKSARIRTISSFNF 155


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 222 DH*RKSEHHGVCYKLWVGNGQHIVRKYFPYNFRLIMAGNF 341
           DH      +G C +  VGN QHIV        R I + NF
Sbjct: 119 DHCTNDAFYG-CVR--VGNRQHIVNPVKSARIRTISSFNF 155


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 222 DH*RKSEHHGVCYKLWVGNGQHIVRKYFPYNFRLIMAGNF 341
           DH      +G C +  VGN QHIV        R I + NF
Sbjct: 137 DHCTNDAFYG-CVR--VGNRQHIVNPVKSARIRTISSFNF 173


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 222 DH*RKSEHHGVCYKLWVGNGQHIVRKYFPYNFRLIMAGNF 341
           DH      +G C +  VGN QHIV        R I + NF
Sbjct: 137 DHCTNDAFYG-CVR--VGNRQHIVNPVKSARIRTISSFNF 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.130    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,144
Number of Sequences: 2352
Number of extensions: 9072
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)