Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20265
         (490 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-P...    29   3.4  
BT011110-1|AAR82777.1| 1777|Drosophila melanogaster LD32107p pro...    29   4.5  
AE014298-1311|AAF46472.2| 1837|Drosophila melanogaster CG12124-P...    29   4.5  

>AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-PA
           protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 75  RGHFSDAGADGEHARREHHEKFH 7
           +GH    G  GEH   E HEK H
Sbjct: 78  KGHHDKEGKKGEHGEEEGHEKKH 100


>BT011110-1|AAR82777.1| 1777|Drosophila melanogaster LD32107p protein.
          Length = 1777

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 223  IIDGSRNTMEYATSCGSATDSTLSESTSPITLDSS 327
            II+GS N+   ATS  S++ S+ S S+S  +  SS
Sbjct: 1130 IIEGSSNSSSSATSSSSSSSSSSSSSSSSSSSSSS 1164


>AE014298-1311|AAF46472.2| 1837|Drosophila melanogaster CG12124-PA
            protein.
          Length = 1837

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +1

Query: 223  IIDGSRNTMEYATSCGSATDSTLSESTSPITLDSS 327
            II+GS N+   ATS  S++ S+ S S+S  +  SS
Sbjct: 1190 IIEGSSNSSSSATSSSSSSSSSSSSSSSSSSSSSS 1224


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.130    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,426,201
Number of Sequences: 53049
Number of extensions: 402872
Number of successful extensions: 1485
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)