Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20263
(482 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003239-1|AAO24996.1| 312|Drosophila melanogaster LD48066p pro... 50 2e-06
AY051411-1|AAK92835.1| 751|Drosophila melanogaster GH09153p pro... 50 2e-06
AE014297-3430|AAF56217.1| 751|Drosophila melanogaster CG13604-P... 50 2e-06
BT030426-1|ABO52846.1| 703|Drosophila melanogaster IP17795p pro... 29 2.5
BT009954-1|AAQ22423.1| 706|Drosophila melanogaster RH48555p pro... 29 2.5
AY051577-1|AAK93001.1| 716|Drosophila melanogaster GH22838p pro... 29 2.5
AE013599-1565|AAM68648.2| 671|Drosophila melanogaster CG8772-PF... 29 2.5
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 29 2.5
AE013599-1563|AAM68646.1| 658|Drosophila melanogaster CG8772-PC... 29 2.5
AE013599-1562|AAM68645.1| 648|Drosophila melanogaster CG8772-PE... 29 2.5
AE013599-1561|AAM68644.1| 716|Drosophila melanogaster CG8772-PD... 29 2.5
AE013599-1560|AAM68643.1| 706|Drosophila melanogaster CG8772-PA... 29 2.5
X95250-1|CAA64539.1| 192|Drosophila melanogaster Not22 protein. 28 5.8
AE013599-3518|AAN16119.1| 281|Drosophila melanogaster CG32834-P... 28 7.7
>BT003239-1|AAO24996.1| 312|Drosophila melanogaster LD48066p
protein.
Length = 312
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Frame = +2
Query: 2 DGLRADPSVKIKVEPGLFEFKNWHMPKGI-DFMTPIELCKAGLNVDMTYKPY---VEMDA 169
+GL+ KIK+EPGLFE+ W+ P G+ D++T EL +A +VD+ Y+P E+ A
Sbjct: 151 EGLKLTGKQKIKLEPGLFEWMAWY-PSGVPDWLTKNELTEAKFDVDLDYEPVQPASELTA 209
Query: 170 S-AETMDEFFKRG-EVAMQ 220
E+ ++F++R +V +Q
Sbjct: 210 RLKESTEQFYERNHDVILQ 228
>AY051411-1|AAK92835.1| 751|Drosophila melanogaster GH09153p
protein.
Length = 751
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Frame = +2
Query: 2 DGLRADPSVKIKVEPGLFEFKNWHMPKGI-DFMTPIELCKAGLNVDMTYKPY---VEMDA 169
+GL+ KIK+EPGLFE+ W+ P G+ D++T EL +A +VD+ Y+P E+ A
Sbjct: 590 EGLKLTGKQKIKLEPGLFEWMAWY-PSGVPDWLTKNELTEAKFDVDLDYEPVQPASELTA 648
Query: 170 S-AETMDEFFKRG-EVAMQ 220
E+ ++F++R +V +Q
Sbjct: 649 RLKESTEQFYERNHDVILQ 667
>AE014297-3430|AAF56217.1| 751|Drosophila melanogaster CG13604-PA
protein.
Length = 751
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Frame = +2
Query: 2 DGLRADPSVKIKVEPGLFEFKNWHMPKGI-DFMTPIELCKAGLNVDMTYKPY---VEMDA 169
+GL+ KIK+EPGLFE+ W+ P G+ D++T EL +A +VD+ Y+P E+ A
Sbjct: 590 EGLKLTGKQKIKLEPGLFEWMAWY-PSGVPDWLTKNELTEAKFDVDLDYEPVQPASELTA 648
Query: 170 S-AETMDEFFKRG-EVAMQ 220
E+ ++F++R +V +Q
Sbjct: 649 RLKESTEQFYERNHDVILQ 667
>BT030426-1|ABO52846.1| 703|Drosophila melanogaster IP17795p
protein.
Length = 703
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 177 RQWTSSSNAAK*RCRPXSTTPKKTAVRNIHWARDHTGPDGGSAAPTPRRHGGRA 338
R W ++ + C+P + T K A I D S PTP G RA
Sbjct: 620 RSWAEKADQSSEECKPEAVTSKTQADEEICSTSDLETSPTTSPIPTPVESGSRA 673
>BT009954-1|AAQ22423.1| 706|Drosophila melanogaster RH48555p
protein.
Length = 706
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 177 RQWTSSSNAAK*RCRPXSTTPKKTAVRNIHWARDHTGPDGGSAAPTPRRHGGRA 338
R W ++ + C+P + T K A I D S PTP G RA
Sbjct: 623 RSWAEKADQSSEECKPEAVTSKTQADEEICSTSDLETSPTTSPIPTPVESGSRA 676
>AY051577-1|AAK93001.1| 716|Drosophila melanogaster GH22838p
protein.
Length = 716
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 177 RQWTSSSNAAK*RCRPXSTTPKKTAVRNIHWARDHTGPDGGSAAPTPRRHGGRA 338
R W ++ + C+P + T K A I D S PTP G RA
Sbjct: 633 RSWAEKADQSSEECKPEAVTSKTQADEEICSTSDLETSPTTSPIPTPVESGSRA 686
>AE013599-1565|AAM68648.2| 671|Drosophila melanogaster CG8772-PF,
isoform F protein.
Length = 671
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 177 RQWTSSSNAAK*RCRPXSTTPKKTAVRNIHWARDHTGPDGGSAAPTPRRHGGRA 338
R W ++ + C+P + T K A I D S PTP G RA
Sbjct: 588 RSWAEKADQSSEECKPEAVTSKTQADEEICSTSDLETSPTTSPIPTPVESGSRA 641
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 177 RQWTSSSNAAK*RCRPXSTTPKKTAVRNIHWARDHTGPDGGSAAPTPRRHGGRA 338
R W ++ + C+P + T K A I D S PTP G RA
Sbjct: 654 RSWAEKADQSSEECKPEAVTSKTQADEEICSTSDLETSPTTSPIPTPVESGSRA 707
>AE013599-1563|AAM68646.1| 658|Drosophila melanogaster CG8772-PC,
isoform C protein.
Length = 658
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 177 RQWTSSSNAAK*RCRPXSTTPKKTAVRNIHWARDHTGPDGGSAAPTPRRHGGRA 338
R W ++ + C+P + T K A I D S PTP G RA
Sbjct: 575 RSWAEKADQSSEECKPEAVTSKTQADEEICSTSDLETSPTTSPIPTPVESGSRA 628
>AE013599-1562|AAM68645.1| 648|Drosophila melanogaster CG8772-PE,
isoform E protein.
Length = 648
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 177 RQWTSSSNAAK*RCRPXSTTPKKTAVRNIHWARDHTGPDGGSAAPTPRRHGGRA 338
R W ++ + C+P + T K A I D S PTP G RA
Sbjct: 565 RSWAEKADQSSEECKPEAVTSKTQADEEICSTSDLETSPTTSPIPTPVESGSRA 618
>AE013599-1561|AAM68644.1| 716|Drosophila melanogaster CG8772-PD,
isoform D protein.
Length = 716
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 177 RQWTSSSNAAK*RCRPXSTTPKKTAVRNIHWARDHTGPDGGSAAPTPRRHGGRA 338
R W ++ + C+P + T K A I D S PTP G RA
Sbjct: 633 RSWAEKADQSSEECKPEAVTSKTQADEEICSTSDLETSPTTSPIPTPVESGSRA 686
>AE013599-1560|AAM68643.1| 706|Drosophila melanogaster CG8772-PA,
isoform A protein.
Length = 706
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 177 RQWTSSSNAAK*RCRPXSTTPKKTAVRNIHWARDHTGPDGGSAAPTPRRHGGRA 338
R W ++ + C+P + T K A I D S PTP G RA
Sbjct: 623 RSWAEKADQSSEECKPEAVTSKTQADEEICSTSDLETSPTTSPIPTPVESGSRA 676
>X95250-1|CAA64539.1| 192|Drosophila melanogaster Not22 protein.
Length = 192
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 85 NRLHDAHRTVQGRPQRRHDLQTVRR 159
+RL H V+G P+R H LQ+V R
Sbjct: 64 DRLGGLHAGVRGLPERHHQLQSVAR 88
>AE013599-3518|AAN16119.1| 281|Drosophila melanogaster CG32834-PA
protein.
Length = 281
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 197 KRGEVAMQAXVNDTEKDGGT*YSL---GTRSHWTRWWERCTDS 316
K E + + E D G+ ++ G+ S W WW+RC S
Sbjct: 123 KTSEAIQPISIAEDEPDDGSWCTVSGWGSTSWWGSWWDRCFGS 165
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,397,429
Number of Sequences: 53049
Number of extensions: 506414
Number of successful extensions: 1530
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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