Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20257
(419 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 32 0.68
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 32 0.68
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 32 0.68
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 32 0.68
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 32 0.68
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 32 0.68
U77718-1|AAB48304.1| 743|Homo sapiens pinin protein. 31 2.1
BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome associ... 31 2.1
BC133039-1|AAI33040.1| 1001|Homo sapiens TAO kinase 1 protein. 30 2.7
AY049015-1|AAL12217.1| 1001|Homo sapiens serine/threonine kinase... 30 2.7
AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome associ... 30 2.7
AK024376-1|BAB14901.1| 398|Homo sapiens protein ( Homo sapiens ... 30 2.7
AF263312-1|AAG38502.1| 1001|Homo sapiens STE20-like kinase protein. 30 2.7
AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein. 30 2.7
AB037782-1|BAA92599.1| 1005|Homo sapiens KIAA1361 protein protein. 30 2.7
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 30 3.6
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 3.6
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 3.6
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 30 3.6
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 30 3.6
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 3.6
Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3 prot... 29 6.3
AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3 pr... 29 6.3
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 32.3 bits (70), Expect = 0.68
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 202 KQRTKE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRS----VVRAPSDARERQ 360
K+R+K P ++ AR+ ++ +RRR R+ P+ PRS + R+PS R ++
Sbjct: 320 KKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKK 376
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 32.3 bits (70), Expect = 0.68
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 202 KQRTKE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRS----VVRAPSDARERQ 360
K+R+K P ++ AR+ ++ +RRR R+ P+ PRS + R+PS R ++
Sbjct: 168 KKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKK 224
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 32.3 bits (70), Expect = 0.68
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 202 KQRTKE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRS----VVRAPSDARERQ 360
K+R+K P ++ AR+ ++ +RRR R+ P+ PRS + R+PS R ++
Sbjct: 320 KKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKK 376
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 32.3 bits (70), Expect = 0.68
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 202 KQRTKE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRS----VVRAPSDARERQ 360
K+R+K P ++ AR+ ++ +RRR R+ P+ PRS + R+PS R ++
Sbjct: 260 KKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKK 316
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 32.3 bits (70), Expect = 0.68
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 202 KQRTKE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRS----VVRAPSDARERQ 360
K+R+K P ++ AR+ ++ +RRR R+ P+ PRS + R+PS R ++
Sbjct: 320 KKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKK 376
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 32.3 bits (70), Expect = 0.68
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 202 KQRTKE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRS----VVRAPSDARERQ 360
K+R+K P ++ AR+ ++ +RRR R+ P+ PRS + R+PS R ++
Sbjct: 320 KKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKK 376
>U77718-1|AAB48304.1| 743|Homo sapiens pinin protein.
Length = 743
Score = 30.7 bits (66), Expect = 2.1
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +1
Query: 10 SFTPRNLTCHCRDISGASSTESGNLTSTSTSRRRCGNATTYLAAGLYWPRPGRSLLTTTL 189
S + R+ + SG+SS +S + TS+S+ R + + R T+
Sbjct: 626 SSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS- 684
Query: 190 GW*RKQRT-KE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRSVVRAPSDARERQ 360
G R ++ K R T KD SRS R+R + S RS RS SD ++++
Sbjct: 685 GLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR 742
>BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome
associated protein protein.
Length = 717
Score = 30.7 bits (66), Expect = 2.1
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +1
Query: 10 SFTPRNLTCHCRDISGASSTESGNLTSTSTSRRRCGNATTYLAAGLYWPRPGRSLLTTTL 189
S + R+ + SG+SS +S + TS+S+ R + + R T+
Sbjct: 600 SSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS- 658
Query: 190 GW*RKQRT-KE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRSVVRAPSDARERQ 360
G R ++ K R T KD SRS R+R + S RS RS SD ++++
Sbjct: 659 GLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR 716
>BC133039-1|AAI33040.1| 1001|Homo sapiens TAO kinase 1 protein.
Length = 1001
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 289 RTVGSDPRSPRSVVRAPSDARERQHXGTFQESVSTPKKNQ 408
RT SDP+SP V R S R R+H T + + ++ Q
Sbjct: 413 RTRASDPQSPPQVSRHKSHYRNREHFATIRTASLVTRQMQ 452
>AY049015-1|AAL12217.1| 1001|Homo sapiens serine/threonine kinase
TAO1 protein.
Length = 1001
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 289 RTVGSDPRSPRSVVRAPSDARERQHXGTFQESVSTPKKNQ 408
RT SDP+SP V R S R R+H T + + ++ Q
Sbjct: 413 RTRASDPQSPPQVSRHKSHYRNREHFATIRTASLVTRQMQ 452
>AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome
associated protein variant protein.
Length = 717
Score = 30.3 bits (65), Expect = 2.7
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +1
Query: 10 SFTPRNLTCHCRDISGASSTESGNLTSTSTSRRRCGNATTYLAAGLYWPRPGRSLLTTTL 189
S + R+ + SG+SS +S + TS+S+ R + + R T+
Sbjct: 600 SSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS- 658
Query: 190 GW*RKQRT-KE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRSVVRAPSDARERQ 360
G R ++ K R T KD SRS R+R + S RS RS SD ++++
Sbjct: 659 GLERSHKSSKGGGSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR 716
>AK024376-1|BAB14901.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ14314 fis, clone PLACE3000350, weakly similar to
SERINE/THREONINE-PROTEIN KINASE SULU (EC 2.7.1.-). ).
Length = 398
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 289 RTVGSDPRSPRSVVRAPSDARERQHXGTFQESVSTPKKNQ 408
RT SDP+SP V R S R R+H T + + ++ Q
Sbjct: 239 RTRASDPQSPPQVSRHKSHYRNREHFATIRTASLVTRQMQ 278
>AF263312-1|AAG38502.1| 1001|Homo sapiens STE20-like kinase protein.
Length = 1001
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 289 RTVGSDPRSPRSVVRAPSDARERQHXGTFQESVSTPKKNQ 408
RT SDP+SP V R S R R+H T + + ++ Q
Sbjct: 413 RTRASDPQSPPQVSRHKSHYRNREHFATIRTASLVTRQMQ 452
>AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein.
Length = 717
Score = 30.3 bits (65), Expect = 2.7
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +1
Query: 10 SFTPRNLTCHCRDISGASSTESGNLTSTSTSRRRCGNATTYLAAGLYWPRPGRSLLTTTL 189
S + R+ + SG+SS +S + TS+S+ R + + R T+
Sbjct: 600 SSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS- 658
Query: 190 GW*RKQRT-KE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRSVVRAPSDARERQ 360
G R ++ K R T KD SRS R+R + S RS RS SD ++++
Sbjct: 659 GLERSPKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR 716
>AB037782-1|BAA92599.1| 1005|Homo sapiens KIAA1361 protein protein.
Length = 1005
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 289 RTVGSDPRSPRSVVRAPSDARERQHXGTFQESVSTPKKNQ 408
RT SDP+SP V R S R R+H T + + ++ Q
Sbjct: 417 RTRASDPQSPPQVSRHKSHYRNREHFATIRTASLVTRQMQ 456
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 235 TPARKDLTSRSKRRRLSGRTVGSDPRSPRS-----VVRAPSDARERQHXGTFQESVSTPK 399
TPAR+ SRS+ GR+ PR RS V R S +R Q G + S+ +
Sbjct: 673 TPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRG--RSGSSSER 730
Query: 400 KNQLRT 417
KN+ RT
Sbjct: 731 KNKSRT 736
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 235 TPARKDLTSRSKRRRLSGRTVGSDPRSPRS-----VVRAPSDARERQHXGTFQESVSTPK 399
TPAR+ SRS+ GR+ PR RS V R S +R Q G + S+ +
Sbjct: 673 TPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRG--RSGSSSER 730
Query: 400 KNQLRT 417
KN+ RT
Sbjct: 731 KNKSRT 736
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 235 TPARKDLTSRSKRRRLSGRTVGSDPRSPRS-----VVRAPSDARERQHXGTFQESVSTPK 399
TPAR+ SRS+ GR+ PR RS V R S +R Q G + S+ +
Sbjct: 673 TPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRG--RSGSSSER 730
Query: 400 KNQLRT 417
KN+ RT
Sbjct: 731 KNKSRT 736
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 235 TPARKDLTSRSKRRRLSGRTVGSDPRSPRS-----VVRAPSDARERQHXGTFQESVSTPK 399
TPAR+ SRS+ GR+ PR RS V R S +R Q G + S+ +
Sbjct: 638 TPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRG--RSGSSSER 695
Query: 400 KNQLRT 417
KN+ RT
Sbjct: 696 KNKSRT 701
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 235 TPARKDLTSRSKRRRLSGRTVGSDPRSPRS-----VVRAPSDARERQHXGTFQESVSTPK 399
TPAR+ SRS+ GR+ PR RS V R S +R Q G + S+ +
Sbjct: 463 TPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRG--RSGSSSER 520
Query: 400 KNQLRT 417
KN+ RT
Sbjct: 521 KNKSRT 526
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 235 TPARKDLTSRSKRRRLSGRTVGSDPRSPRS-----VVRAPSDARERQHXGTFQESVSTPK 399
TPAR+ SRS+ GR+ PR RS V R S +R Q G + S+ +
Sbjct: 721 TPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRG--RSGSSSER 778
Query: 400 KNQLRT 417
KN+ RT
Sbjct: 779 KNKSRT 784
>Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3
protein.
Length = 711
Score = 29.1 bits (62), Expect = 6.3
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +1
Query: 10 SFTPRNLTCHCRDISGASSTESGNLTSTSTSRRRCGNATTYLAAGLYWPRPGRSLLTTTL 189
S + R+ + SG+S +S + TS+S+ R + + R T+
Sbjct: 594 SSSSRSSSSSSSSTSGSSGRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS- 652
Query: 190 GW*RKQRT-KE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRSVVRAPSDARERQ 360
G R ++ K R T KD SRS R+R + S RS RS SD ++++
Sbjct: 653 GLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR 710
>AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3
protein.
Length = 717
Score = 29.1 bits (62), Expect = 6.3
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Frame = +1
Query: 10 SFTPRNLTCHCRDISGASSTESGNLTSTSTSRRRCGNATTYLAAGLYWPRPGRSLLTTTL 189
S + R+ + SG+S +S + TS+S+ R + + R T+
Sbjct: 600 SSSSRSSSSSSSSTSGSSGRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTS- 658
Query: 190 GW*RKQRT-KE*PVRWTPARKDLTSRSKRRRLSGRTVGSDPRSPRSVVRAPSDARERQ 360
G R ++ K R T KD SRS R+R + S RS RS SD ++++
Sbjct: 659 GLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR 716
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,018,685
Number of Sequences: 237096
Number of extensions: 1279875
Number of successful extensions: 3390
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3384
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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