Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20256
(489 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 30 0.037
AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein. 27 0.26
AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein. 27 0.26
AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein. 27 0.26
AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein. 27 0.26
AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein. 27 0.26
AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein. 27 0.26
AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein. 27 0.26
AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein. 27 0.26
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 27 0.34
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 26 0.80
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 7.4
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 30.3 bits (65), Expect = 0.037
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = -1
Query: 342 VRSNISSTGKEPKPLGKLYSLFNETLRILTWVVMIS*LEALECCYWPSLE 193
+R ++ + P P+G+ L ETL + +++ + A+ C W L+
Sbjct: 272 LRDYLAQRNRTPAPVGRWQRLRTETLNAVAHATVLALIAAVAACLWAVLD 321
>AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 27.5 bits (58), Expect = 0.26
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
L+V N+L +LP G L LD +YN L E
Sbjct: 140 LSVPRNRLRDLPTGVERLTALRKLDYSYNLLEE 172
>AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 27.5 bits (58), Expect = 0.26
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
L+V N+L +LP G L LD +YN L E
Sbjct: 140 LSVPRNRLRDLPTGVERLTALRKLDYSYNLLEE 172
>AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 27.5 bits (58), Expect = 0.26
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
L+V N+L +LP G L LD +YN L E
Sbjct: 140 LSVPRNRLRDLPTGVERLTALRKLDYSYNLLEE 172
>AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 27.5 bits (58), Expect = 0.26
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
L+V N+L +LP G L LD +YN L E
Sbjct: 140 LSVPRNRLRDLPTGVERLTALRKLDYSYNLLEE 172
>AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 27.5 bits (58), Expect = 0.26
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
L+V N+L +LP G L LD +YN L E
Sbjct: 140 LSVPRNRLRDLPTGVERLTALRKLDYSYNLLEE 172
>AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 27.5 bits (58), Expect = 0.26
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
L+V N+L +LP G L LD +YN L E
Sbjct: 140 LSVPRNRLRDLPTGVERLTALRKLDYSYNLLEE 172
>AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 27.5 bits (58), Expect = 0.26
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
L+V N+L +LP G L LD +YN L E
Sbjct: 140 LSVPRNRLRDLPTGVERLTALRKLDYSYNLLEE 172
>AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 27.5 bits (58), Expect = 0.26
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
L+V N+L +LP G L LD +YN L E
Sbjct: 140 LSVPRNRLRDLPTGVERLTALRKLDYSYNLLEE 172
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 27.1 bits (57), Expect = 0.34
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
L+++ NKL +P P+L LDL N+++ + +F M L L L +N++
Sbjct: 434 LHLNGNKLLQVPDALYDVPLLRTLDLGENHIS-NIDNASFRHMAHLYGLRLTENNI 488
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 25.8 bits (54), Expect = 0.80
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 305 FGSFPVLEILDLTYNNLNEKVLPGNFFI-MDRLRALYLGDNDL 430
FG LE+LDL+ NN+ LP + F + LR+L + N L
Sbjct: 167 FGQTRNLEVLDLSTNNIWS--LPDHLFCSLSGLRSLNISSNRL 207
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 22.6 bits (46), Expect = 7.4
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +2
Query: 116 HHSXVPKPQQNLCXAC 163
HH+ + +PQ + C C
Sbjct: 913 HHANIHRPQSHECPVC 928
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,051
Number of Sequences: 2352
Number of extensions: 6816
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -