Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20256
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46996-5|CAA87096.1| 268|Caenorhabditis elegans Hypothetical pr... 99 9e-22
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 40 0.001
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 39 0.002
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 39 0.002
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 39 0.002
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 39 0.002
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 36 0.021
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 34 0.048
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 34 0.048
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 34 0.048
U29380-13|AAL11485.1| 227|Caenorhabditis elegans Hypothetical p... 33 0.15
U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical p... 33 0.15
U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical p... 33 0.15
Z68753-6|CAD45610.1| 597|Caenorhabditis elegans Hypothetical pr... 31 0.34
Z68753-5|CAB54512.2| 613|Caenorhabditis elegans Hypothetical pr... 31 0.34
Z68753-4|CAB54511.2| 606|Caenorhabditis elegans Hypothetical pr... 31 0.34
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 31 0.34
AY043268-1|AAK85706.1| 606|Caenorhabditis elegans CCR4 protein. 31 0.34
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 31 0.45
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 31 0.45
Z83230-2|CAC42304.1| 444|Caenorhabditis elegans Hypothetical pr... 30 0.78
Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical pr... 30 0.78
U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical pr... 30 0.78
AC006762-8|AAP31426.1| 295|Caenorhabditis elegans Hypothetical ... 30 1.0
AC006762-7|AAF60555.1| 375|Caenorhabditis elegans Hypothetical ... 30 1.0
Z68116-11|CAA92176.1| 317|Caenorhabditis elegans Hypothetical p... 29 1.4
Z68114-12|CAA92163.1| 317|Caenorhabditis elegans Hypothetical p... 29 1.4
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 29 1.8
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 29 1.8
AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical ... 28 4.2
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 27 7.3
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 27 9.7
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 27 9.7
>Z46996-5|CAA87096.1| 268|Caenorhabditis elegans Hypothetical
protein C34C12.5 protein.
Length = 268
Score = 99 bits (238), Expect = 9e-22
Identities = 46/59 (77%), Positives = 51/59 (86%)
Frame = +2
Query: 251 QVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
++RILNV +NKL LPRGFGSFP LEILDLTYNNL+E+ LPGNFF M LRALYLGDND
Sbjct: 80 KLRILNVGMNKLSILPRGFGSFPELEILDLTYNNLSERSLPGNFFFMQTLRALYLGDND 138
Score = 46.0 bits (104), Expect = 1e-05
Identities = 26/69 (37%), Positives = 34/69 (49%)
Frame = +3
Query: 48 EIDLVDKGISSXEEIPGLFSXENITRLSLSHNKISVXPXXXXXXXXXXXXXXXXXXXXXX 227
E++ VD+ ISS +I L E ITRL+LSHNK++ P
Sbjct: 12 EVEHVDRNISSFSQISHLIDAEIITRLTLSHNKLTSVPPNIADLVSLQSLNLWNNQIEDL 71
Query: 228 PVSLSSLPK 254
P S+SSLPK
Sbjct: 72 PPSISSLPK 80
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/67 (38%), Positives = 36/67 (53%)
Frame = +2
Query: 230 SQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRAL 409
SQL T + +L +S N++ + P S L LDL++NNL+ LP +F M LR L
Sbjct: 184 SQLRYLTSLEVLKISRNRVEDFPAELCSSLKLRTLDLSHNNLS--YLPADFVKMTDLRYL 241
Query: 410 YLGDNDL 430
L N L
Sbjct: 242 QLECNPL 248
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +2
Query: 176 LEQLRNSKLGQ*QHSRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 355
L +LR L + + +++ + L V NK+ LPR G+ L+ L L NNL
Sbjct: 420 LNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNL 479
Query: 356 NEKVLPGNFFIMDRLRALYLGDN 424
+P +D L++LYL DN
Sbjct: 480 T--AIPEEIGHLDSLKSLYLNDN 500
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDN 424
L +S N L +LP S LE LDL +N L E +P + + L L+L N
Sbjct: 124 LGLSENALTSLPDSLASLESLETLDLRHNKLTE--VPSVIYKIGSLETLWLRYN 175
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 248 TQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
+++++L+V NK+ LP G L + ++YN+L +P L L L ND
Sbjct: 188 SKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTR--VPEEIGDCHSLTQLDLQHND 245
Query: 428 L 430
L
Sbjct: 246 L 246
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +2
Query: 176 LEQLRNSKLGQ*QHSRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 355
L +LR L + + +++ + L V NK+ LPR G+ L+ L L NNL
Sbjct: 419 LNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNL 478
Query: 356 NEKVLPGNFFIMDRLRALYLGDN 424
+P +D L++LYL DN
Sbjct: 479 T--AIPEEIGHLDSLKSLYLNDN 499
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDN 424
L +S N L +LP S LE LDL +N L E +P + + L L+L N
Sbjct: 123 LGLSENALTSLPDSLASLESLETLDLRHNKLTE--VPSVIYKIGSLETLWLRYN 174
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 248 TQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
+++++L+V NK+ LP G L + ++YN+L +P L L L ND
Sbjct: 187 SKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTR--VPEEIGDCHSLTQLDLQHND 244
Query: 428 L 430
L
Sbjct: 245 L 245
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +2
Query: 176 LEQLRNSKLGQ*QHSRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 355
L +LR L + + +++ + L V NK+ LPR G+ L+ L L NNL
Sbjct: 420 LNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNL 479
Query: 356 NEKVLPGNFFIMDRLRALYLGDN 424
+P +D L++LYL DN
Sbjct: 480 T--AIPEEIGHLDSLKSLYLNDN 500
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDN 424
L +S N L +LP S LE LDL +N L E +P + + L L+L N
Sbjct: 124 LGLSENALTSLPDSLASLESLETLDLRHNKLTE--VPSVIYKIGSLETLWLRYN 175
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 248 TQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
+++++L+V NK+ LP G L + ++YN+L +P L L L ND
Sbjct: 188 SKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTR--VPEEIGDCHSLTQLDLQHND 245
Query: 428 L 430
L
Sbjct: 246 L 246
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +2
Query: 176 LEQLRNSKLGQ*QHSRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 355
L +LR L + + +++ + L V NK+ LPR G+ L+ L L NNL
Sbjct: 420 LNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNL 479
Query: 356 NEKVLPGNFFIMDRLRALYLGDN 424
+P +D L++LYL DN
Sbjct: 480 T--AIPEEIGHLDSLKSLYLNDN 500
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDN 424
L +S N L +LP S LE LDL +N L E +P + + L L+L N
Sbjct: 124 LGLSENALTSLPDSLASLESLETLDLRHNKLTE--VPSVIYKIGSLETLWLRYN 175
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 248 TQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
+++++L+V NK+ LP G L + ++YN+L +P L L L ND
Sbjct: 188 SKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTR--VPEEIGDCHSLTQLDLQHND 245
Query: 428 L 430
L
Sbjct: 246 L 246
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 35.5 bits (78), Expect = 0.021
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +2
Query: 224 ASSQLIITTQVRILNVSLNKLYNLPRG-FGSFPVLEILDLTYNNLNEKVLP-GNFFIMDR 397
A S+ I + +L++ N + + FG P L +LDL+ N+LN +LP G F +
Sbjct: 103 AMSRSIRLPSLEVLDLHSNNIEHATMSNFGGMPKLRVLDLSSNHLN--ILPTGVFTYLRA 160
Query: 398 LRALYLGDNDL 430
LR+L L +N +
Sbjct: 161 LRSLSLSNNTI 171
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 34.3 bits (75), Expect = 0.048
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
LN+S+N++ LP FG L++L N+L+ L L LYLG N L
Sbjct: 248 LNISINEIIELPSSFGELKRLQMLKADRNSLHN--LTSEIGKCQSLTELYLGQNFL 301
Score = 31.9 bits (69), Expect = 0.26
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +2
Query: 173 QLEQLRNSKLGQ*QHSRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNN 352
+L +L LGQ + +++ T +R V +N L +LP +L+ LD++ N
Sbjct: 172 ELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQ 231
Query: 353 LNEKVLPGNFFIMDRLRALYLGDNDL 430
+ LP N M L L + N++
Sbjct: 232 IIR--LPENLGRMPNLTDLNISINEI 255
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 248 TQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
T +R+L N L +P LE LDL N L + LP + LR Y+ N
Sbjct: 151 TNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNEL--EALPAEIGKLTSLREFYVDINS 208
Query: 428 L 430
L
Sbjct: 209 L 209
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 34.3 bits (75), Expect = 0.048
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
LN+S+N++ LP FG L++L N+L+ L L LYLG N L
Sbjct: 248 LNISINEIIELPSSFGELKRLQMLKADRNSLHN--LTSEIGKCQSLTELYLGQNFL 301
Score = 31.9 bits (69), Expect = 0.26
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +2
Query: 173 QLEQLRNSKLGQ*QHSRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNN 352
+L +L LGQ + +++ T +R V +N L +LP +L+ LD++ N
Sbjct: 172 ELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQ 231
Query: 353 LNEKVLPGNFFIMDRLRALYLGDNDL 430
+ LP N M L L + N++
Sbjct: 232 IIR--LPENLGRMPNLTDLNISINEI 255
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 248 TQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
T +R+L N L +P LE LDL N L + LP + LR Y+ N
Sbjct: 151 TNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNEL--EALPAEIGKLTSLREFYVDINS 208
Query: 428 L 430
L
Sbjct: 209 L 209
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 34.3 bits (75), Expect = 0.048
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
LN+S+N++ LP FG L++L N+L+ L L LYLG N L
Sbjct: 248 LNISINEIIELPSSFGELKRLQMLKADRNSLHN--LTSEIGKCQSLTELYLGQNFL 301
Score = 31.9 bits (69), Expect = 0.26
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +2
Query: 173 QLEQLRNSKLGQ*QHSRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNN 352
+L +L LGQ + +++ T +R V +N L +LP +L+ LD++ N
Sbjct: 172 ELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQ 231
Query: 353 LNEKVLPGNFFIMDRLRALYLGDNDL 430
+ LP N M L L + N++
Sbjct: 232 IIR--LPENLGRMPNLTDLNISINEI 255
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 248 TQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
T +R+L N L +P LE LDL N L + LP + LR Y+ N
Sbjct: 151 TNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNEL--EALPAEIGKLTSLREFYVDINS 208
Query: 428 L 430
L
Sbjct: 209 L 209
>U29380-13|AAL11485.1| 227|Caenorhabditis elegans Hypothetical
protein ZK546.2b protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +2
Query: 251 QVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
Q+ ILN++ N++ +LP + V+E L L N L+ + P N RLR L L +N L
Sbjct: 120 QLDILNLNGNQIESLPDDISNLKVIE-LSLNQNRLS-SLNPSNLAKTTRLRTLRLDENCL 177
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 254 VRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
+R L +S NK+ +P G F L+ L L N L + LP M +L L L N L
Sbjct: 29 LRNLELSENKIREIPIFIGQFSQLKQLHLANNCL--EFLPDELGSMKKLEILNLAGNKL 85
>U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical
protein ZK546.2a protein.
Length = 485
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +2
Query: 251 QVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
Q+ ILN++ N++ +LP + V+E L L N L+ + P N RLR L L +N L
Sbjct: 378 QLDILNLNGNQIESLPDDISNLKVIE-LSLNQNRLS-SLNPSNLAKTTRLRTLRLDENCL 435
Score = 30.7 bits (66), Expect = 0.59
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 248 TQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
+ ++ LN+S N+L +LP S LE+L+++ N L E
Sbjct: 64 SHLKNLNLSRNQLESLPLEINSLACLEVLNVSQNKLTE 101
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 254 VRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
+R L +S NK+ +P G F L+ L L N L + LP M +L L L N L
Sbjct: 287 LRNLELSENKIREIPIFIGQFSQLKQLHLANNCL--EFLPDELGSMKKLEILNLAGNKL 343
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +2
Query: 230 SQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRAL 409
++L ++ R+L++ + L+ +P +L+ LD++ N L + LP M L+ L
Sbjct: 12 ARLANASKTRVLSLKESALHRIPDDVKDLTMLKHLDMSINYLTQ--LPPFIGSMSHLKNL 69
Query: 410 YLGDNDL 430
L N L
Sbjct: 70 NLSRNQL 76
>U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical
protein ZK546.2c protein.
Length = 501
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +2
Query: 251 QVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
Q+ ILN++ N++ +LP + V+E L L N L+ + P N RLR L L +N L
Sbjct: 394 QLDILNLNGNQIESLPDDISNLKVIE-LSLNQNRLS-SLNPSNLAKTTRLRTLRLDENCL 451
Score = 30.7 bits (66), Expect = 0.59
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 248 TQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
+ ++ LN+S N+L +LP S LE+L+++ N L E
Sbjct: 64 SHLKNLNLSRNQLESLPLEINSLACLEVLNVSQNKLTE 101
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 254 VRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDNDL 430
+R L +S NK+ +P G F L+ L L N L + LP M +L L L N L
Sbjct: 303 LRNLELSENKIREIPIFIGQFSQLKQLHLANNCL--EFLPDELGSMKKLEILNLAGNKL 359
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +2
Query: 230 SQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRAL 409
++L ++ R+L++ + L+ +P +L+ LD++ N L + LP M L+ L
Sbjct: 12 ARLANASKTRVLSLKESALHRIPDDVKDLTMLKHLDMSINYLTQ--LPPFIGSMSHLKNL 69
Query: 410 YLGDNDL 430
L N L
Sbjct: 70 NLSRNQL 76
>Z68753-6|CAD45610.1| 597|Caenorhabditis elegans Hypothetical
protein ZC518.3c protein.
Length = 597
Score = 31.5 bits (68), Expect = 0.34
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +2
Query: 218 SRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDR 397
+R ++ T + +L++S NKL +LP G ++ + L NN +VLP + R
Sbjct: 91 TRLPPEIAQLTNLTMLDISNNKLRSLPTELGD--MISLCHLYLNNNQLRVLPYELGKLFR 148
Query: 398 LRALYLGDNDL 430
++ L L N L
Sbjct: 149 IQTLGLQGNPL 159
>Z68753-5|CAB54512.2| 613|Caenorhabditis elegans Hypothetical
protein ZC518.3b protein.
Length = 613
Score = 31.5 bits (68), Expect = 0.34
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +2
Query: 218 SRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDR 397
+R ++ T + +L++S NKL +LP G ++ + L NN +VLP + R
Sbjct: 107 TRLPPEIAQLTNLTMLDISNNKLRSLPTELGD--MISLCHLYLNNNQLRVLPYELGKLFR 164
Query: 398 LRALYLGDNDL 430
++ L L N L
Sbjct: 165 IQTLGLQGNPL 175
>Z68753-4|CAB54511.2| 606|Caenorhabditis elegans Hypothetical
protein ZC518.3a protein.
Length = 606
Score = 31.5 bits (68), Expect = 0.34
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +2
Query: 218 SRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDR 397
+R ++ T + +L++S NKL +LP G ++ + L NN +VLP + R
Sbjct: 100 TRLPPEIAQLTNLTMLDISNNKLRSLPTELGD--MISLCHLYLNNNQLRVLPYELGKLFR 157
Query: 398 LRALYLGDNDL 430
++ L L N L
Sbjct: 158 IQTLGLQGNPL 168
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 31.5 bits (68), Expect = 0.34
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 VRILNVSLNKLYN-LPRGFGSFPVLEILDLTYNNLNE 361
+R L++S N++ LP P L++L L +NNLNE
Sbjct: 490 LRYLDLSHNRIIKILPSALYQLPALDVLHLDHNNLNE 526
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 VRILNVSLNKLYNL-PRGFGSFPVLEILDLTYNNLNE 361
++ LN+S NK+Y L + + LD+++NNL +
Sbjct: 798 IQSLNISCNKIYELSEKDLAPLTKVVALDISHNNLKQ 834
>AY043268-1|AAK85706.1| 606|Caenorhabditis elegans CCR4 protein.
Length = 606
Score = 31.5 bits (68), Expect = 0.34
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +2
Query: 218 SRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDR 397
+R ++ T + +L++S NKL +LP G ++ + L NN +VLP + R
Sbjct: 100 TRLPPEIAQLTNLTMLDISNNKLRSLPTELGD--MISLCHLYLNNNQLRVLPYELGKLFR 157
Query: 398 LRALYLGDNDL 430
++ L L N L
Sbjct: 158 IQTLGLQGNPL 168
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 31.1 bits (67), Expect = 0.45
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 251 QVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
Q+ +L++S NKL +P G L+ L L +N L LP ++ L+ L L +N+
Sbjct: 317 QLTVLHLSYNKLELVPEGISRCVKLQKLKLDHNRL--ITLPEGIHLLPDLKVLDLHENE 373
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 31.1 bits (67), Expect = 0.45
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 251 QVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDND 427
Q+ +L++S NKL +P G L+ L L +N L LP ++ L+ L L +N+
Sbjct: 317 QLTVLHLSYNKLELVPEGISRCVKLQKLKLDHNRL--ITLPEGIHLLPDLKVLDLHENE 373
>Z83230-2|CAC42304.1| 444|Caenorhabditis elegans Hypothetical
protein F56A8.3a protein.
Length = 444
Score = 30.3 bits (65), Expect = 0.78
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 242 ITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKV 367
+ T ++ LN+ N++ +LP F + L+ LDL N LN K+
Sbjct: 82 LLTSLQHLNLYNNQIEDLPLSFANLKSLKWLDLKKNPLNSKL 123
>Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical
protein R05H10.6 protein.
Length = 1364
Score = 30.3 bits (65), Expect = 0.78
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 184 LLKLASAAGXTEILLWLRDXRVMFSXENKPGISSXL 77
L+K+++ G +E+L LRD +FS K GI S L
Sbjct: 246 LVKISTKGGSSEVLYSLRDASGLFSIHPKEGILSIL 281
>U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical
protein K09C4.10 protein.
Length = 1035
Score = 30.3 bits (65), Expect = 0.78
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 312 EPKPLGKLYSLFNETLRILTWV 247
EPKPL K Y FN+TL T V
Sbjct: 325 EPKPLAKFYKFFNKTLHYETTV 346
>AC006762-8|AAP31426.1| 295|Caenorhabditis elegans Hypothetical
protein Y42G9A.3b protein.
Length = 295
Score = 29.9 bits (64), Expect = 1.0
Identities = 23/85 (27%), Positives = 37/85 (43%)
Frame = +2
Query: 176 LEQLRNSKLGQ*QHSRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 355
+ +L+ LG S + + T +R+L + N+L +P G LE L L N L
Sbjct: 151 MRKLKTLHLGGNYIDSCPSNISVLTLLRVLYLGGNRLREIPASIGCLDELENLGLCDNIL 210
Query: 356 NEKVLPGNFFIMDRLRALYLGDNDL 430
+ +P + L L L +N L
Sbjct: 211 --ETIPSTLGDLHYLETLSLHNNRL 233
>AC006762-7|AAF60555.1| 375|Caenorhabditis elegans Hypothetical
protein Y42G9A.3a protein.
Length = 375
Score = 29.9 bits (64), Expect = 1.0
Identities = 23/85 (27%), Positives = 37/85 (43%)
Frame = +2
Query: 176 LEQLRNSKLGQ*QHSRASSQLIITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNL 355
+ +L+ LG S + + T +R+L + N+L +P G LE L L N L
Sbjct: 151 MRKLKTLHLGGNYIDSCPSNISVLTLLRVLYLGGNRLREIPASIGCLDELENLGLCDNIL 210
Query: 356 NEKVLPGNFFIMDRLRALYLGDNDL 430
+ +P + L L L +N L
Sbjct: 211 --ETIPSTLGDLHYLETLSLHNNRL 233
>Z68116-11|CAA92176.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.8 protein.
Length = 317
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 208 ITTFKSFQSAYHHYPSKDPQCFI 276
+TTF +Q+A H PSK CF+
Sbjct: 107 LTTFMKYQAARHVRPSKKKNCFV 129
>Z68114-12|CAA92163.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.8 protein.
Length = 317
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 208 ITTFKSFQSAYHHYPSKDPQCFI 276
+TTF +Q+A H PSK CF+
Sbjct: 107 LTTFMKYQAARHVRPSKKKNCFV 129
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 278 NKLYNL-PRGFGSFPVLEILDLTYNNLNEKVLPGNFF 385
N++ N+ P GF + P + LD++YN L + +P N F
Sbjct: 364 NRIDNVQPLGFANLPAISHLDISYNLL--QTMPSNVF 398
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 254 VRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDN 424
++ILN+ N+L +PRG LE LDL +NL V + +R++ L N
Sbjct: 102 LKILNIRKNRLARIPRGSHELGHLEKLDLR-SNLISTVTSEELSYLAAVRSVDLSRN 157
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 170 SQLEQLRNSKLGQ*QHSRASSQLIITTQ-VRILNVSLNKLYNLPRG--FGSFPVLEILDL 340
+QL L+N L + R + + ++ LN+S N++ + G FG LE+LDL
Sbjct: 240 NQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFG-LTSLEVLDL 298
Query: 341 TYNNL 355
+YN +
Sbjct: 299 SYNQI 303
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 VRILNVSLNKLYNLP-RGFGSFPVLEILDLTYN 349
+R L + N+L +P R F FP LE LDLT N
Sbjct: 393 LRSLRFTNNQLRVIPKRAFERFPALEELDLTDN 425
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 254 VRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNEKVLPGNFFIMDRLRALYLGDN 424
++ILN+ N+L +PRG LE LDL +NL V + +R++ L N
Sbjct: 102 LKILNIRKNRLARIPRGSHELGHLEKLDLR-SNLISTVTSEELSYLAAVRSVDLSRN 157
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 170 SQLEQLRNSKLGQ*QHSRASSQLIITTQ-VRILNVSLNKLYNLPRG--FGSFPVLEILDL 340
+QL L+N L + R + + ++ LN+S N++ + G FG LE+LDL
Sbjct: 240 NQLPSLQNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFG-LTSLEVLDL 298
Query: 341 TYNNL 355
+YN +
Sbjct: 299 SYNQI 303
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 254 VRILNVSLNKLYNLP-RGFGSFPVLEILDLTYN 349
+R L + N+L +P R F FP LE LDLT N
Sbjct: 393 LRSLRFTNNQLRVIPKRAFERFPALEELDLTDN 425
>AC024810-5|AAF60763.1| 507|Caenorhabditis elegans Hypothetical
protein Y54E10A.6 protein.
Length = 507
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 251 QVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
Q++ L + NKL ++P P L++LD++ N +E
Sbjct: 188 QLKELKIDENKLKDVPSVIAHLPKLKVLDISKNCFSE 224
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYN 349
LN+ NKL +LP + P +E LD++ N
Sbjct: 428 LNLQKNKLKSLPNLIKNLPAIESLDVSSN 456
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 263 LNVSLNKLYNLPRGFGSFPVLEILDLTYN 349
LN+ NKL +LP + P +E LD++ N
Sbjct: 428 LNLQKNKLKSLPNLIKNLPAIESLDVSSN 456
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +2
Query: 242 ITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
+ Q+ I+++S N+L N+ + P + + + YN++ E
Sbjct: 192 VAQQLLIVDLSRNRLTNIEQFLRGIPAIRQISVAYNSIAE 231
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +2
Query: 242 ITTQVRILNVSLNKLYNLPRGFGSFPVLEILDLTYNNLNE 361
+ Q+ I+++S N+L N+ + P + + + YN++ E
Sbjct: 192 VAQQLLIVDLSRNRLTNIEQFLRGIPAIRQISVAYNSIAE 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,208,864
Number of Sequences: 27780
Number of extensions: 162025
Number of successful extensions: 435
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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