Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20249
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069294-1|AAH69294.1|  111|Homo sapiens beta defensin 126, prep...    29   7.5  
AL360078-2|CAC17684.1|  111|Homo sapiens defensin, beta 126 prot...    29   7.5  
AK093764-1|BAC04222.1|  360|Homo sapiens protein ( Homo sapiens ...    29   7.5  
AJ236910-1|CAC27121.1|  111|Homo sapiens ESP13.2 protein protein.      29   7.5  
AF525928-1|AAP47221.1|  111|Homo sapiens beta-defensin 26 precur...    29   7.5  
AK128082-1|BAC87263.1|  236|Homo sapiens protein ( Homo sapiens ...    28   9.9  
AF053356-12|AAC78793.1|  832|Homo sapiens leucin rich neuronal p...    28   9.9  

>BC069294-1|AAH69294.1|  111|Homo sapiens beta defensin 126,
           preproprotein protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 63  CSPPARASLNYPRTLL-TKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 212
           C  PA    NYP   + TKT+R +  TA++ ATTT++   A +M + A  P
Sbjct: 58  CCVPADRRANYPVFCVQTKTTRISTVTATT-ATTTLMMTTA-SMSSMAPTP 106


>AL360078-2|CAC17684.1|  111|Homo sapiens defensin, beta 126
           protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 63  CSPPARASLNYPRTLL-TKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 212
           C  PA    NYP   + TKT+R +  TA++ ATTT++   A +M + A  P
Sbjct: 58  CCVPADRRANYPVFCVQTKTTRISTVTATT-ATTTLMMTTA-SMSSMAPTP 106


>AK093764-1|BAC04222.1|  360|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36445 fis, clone THYMU2013047. ).
          Length = 360

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +3

Query: 12  SERLLTK*NFSLYLRCACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLS 173
           S  LL +   S  +  A SPP   SL     L    SR + +T+SSP + ++LS
Sbjct: 307 SAHLLARSCPSKEVSVALSPPLSLSLGVSFYLTVSLSRLSLSTSSSPISNSLLS 360


>AJ236910-1|CAC27121.1|  111|Homo sapiens ESP13.2 protein protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 63  CSPPARASLNYPRTLL-TKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 212
           C  PA    NYP   + TKT+R +  TA++ ATTT++   A +M + A  P
Sbjct: 58  CCVPADRRANYPVFCVQTKTTRISTVTATT-ATTTLMMTTA-SMSSMAPTP 106


>AF525928-1|AAP47221.1|  111|Homo sapiens beta-defensin 26 precursor
           protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 63  CSPPARASLNYPRTLL-TKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 212
           C  PA    NYP   + TKT+R +  TA++ ATTT++   A +M + A  P
Sbjct: 58  CCVPADRRANYPVFCVQTKTTRISTVTATT-ATTTLMMTTA-SMSSMAPTP 106


>AK128082-1|BAC87263.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46203 fis, clone TESTI4008305. ).
          Length = 236

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 84  SLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWNMRA 197
           S++ PR+L+++ SRR    + S +T   +S   W  RA
Sbjct: 58  SMSRPRSLMSRRSRRTRRMSESVSTKIFMSRSWWRQRA 95


>AF053356-12|AAC78793.1|  832|Homo sapiens leucin rich neuronal
           protein protein.
          Length = 832

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = +1

Query: 112 PRPRGETVQQHPHRRLRQCCPSELG--I*EPRQGLHHP 219
           P PRG TV Q P  +  +C     G  + +PR G+  P
Sbjct: 745 PHPRGPTVAQEPRSQAGRCVTPHSGRCMKQPRAGVSGP 782


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,547,128
Number of Sequences: 237096
Number of extensions: 1083252
Number of successful extensions: 6014
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6014
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)