BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbS20249 (399 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 26 0.18 AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 1.3 AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 6.9 AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 6.9 >AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family protein protein. Length = 166 Score = 25.8 bits (54), Expect = 0.18 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 6/98 (6%) Frame = +2 Query: 47 VFAMCMLAASAGVVELSADTSNQDLEEKLYNS----ILTGDYDSAVRQSLEYESQGKGSI 214 +FA CM ++ +++ D + + L S I++ D+D + EY + + Sbjct: 37 LFARCMGGINSRNMDIEHDPGLAAVLQYLIRSGQLNIISSDHDDSDE---EYAANSQPPR 93 Query: 215 IQNVVNNLIIDKRRTPWSTATSCG--SATDRKLLESTS 322 I +V N +DK +T +CG D++ L TS Sbjct: 94 ITSVPNTSRLDKSEISLATKQACGFIDNIDKRNLSVTS 131 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 23.0 bits (47), Expect = 1.3 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 Query: 99 ADSSTTPALAASMHIANTTRSFILLGAFQI 10 A+ + +A +HI+N T SF L G F++ Sbjct: 396 ANKMESSGMAGRVHISNATLSF-LNGEFEV 424 >AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex determiner protein. Length = 418 Score = 20.6 bits (41), Expect = 6.9 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -1 Query: 111 LEVSADSSTTPALAASMHIANTTRSFIL 28 LE S S +P + +NT+++FIL Sbjct: 80 LERSKTKSKSPESRDRSNTSNTSKTFIL 107 >AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. Length = 493 Score = 20.6 bits (41), Expect = 6.9 Identities = 10/33 (30%), Positives = 16/33 (48%) Frame = -3 Query: 142 AVVQFLLEVLVRSVRG*FNDARAGGEHAHRKYN 44 A V+ ++V++ + G NDA G YN Sbjct: 107 AGVRIYVDVIMNHMSGDRNDAHGTGNSRANTYN 139 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 104,477 Number of Sequences: 438 Number of extensions: 2097 Number of successful extensions: 4 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 9885360 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
- SilkBase 1999-2023 -