Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20247
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   1.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.3  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   5.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   5.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   9.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   9.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.4  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    21   9.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.4  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 435 LLNSEVVLLLWRKLCVFVCVCFP 503
           L   E + L+WR++C FV   +P
Sbjct: 156 LFIKEELDLVWREVCTFVVQVYP 178


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 70  QRTEWCFRLVRYWFNNRRDNL 8
           QRT+     ++ WF+NRR  L
Sbjct: 255 QRTKLTEARIQVWFSNRRARL 275


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 540 CFLINDMFSNSITGSTHTQTHTVFAITRARL 448
           C + +  FS S + +TH +TH+     R RL
Sbjct: 52  CPVCDRRFSQSSSVTTHMRTHSGERPYRCRL 82


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 540 CFLINDMFSNSITGSTHTQTHTVFAITRARL 448
           C + +  FS S + +TH +TH+     R RL
Sbjct: 308 CPVCDRRFSQSSSVTTHMRTHSGERPYRCRL 338


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 49 RLVRYWFNNRRDNL 8
          R ++ WF NRR  L
Sbjct: 48 RQIKIWFQNRRMKL 61


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 49  RLVRYWFNNRRDNL 8
           R ++ WF NRR  L
Sbjct: 265 RQIKIWFQNRRMKL 278


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
          transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 49 RLVRYWFNNRR 17
          R V+ WF NRR
Sbjct: 46 RQVKVWFQNRR 56


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 256 RIYRPKVCRRYVPREPLCFLQSKD 327
           ++Y P V   ++  EP+  ++S D
Sbjct: 272 KVYAPVVDGEFLTDEPIAIIKSGD 295


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 256 RIYRPKVCRRYVPREPLCFLQSKD 327
           ++Y P V   ++  EP+  ++S D
Sbjct: 272 KVYAPVVDGEFLTDEPIAIIKSGD 295


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 256 RIYRPKVCRRYVPREPLCFLQSKD 327
           ++Y P V   ++  EP+  ++S D
Sbjct: 274 KVYAPVVDGEFLTDEPIAIIKSGD 297


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 49  RLVRYWFNNRR 17
           R V+ WF NRR
Sbjct: 198 RQVKIWFQNRR 208


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 49  RLVRYWFNNRR 17
           R V+ WF NRR
Sbjct: 285 RQVKIWFQNRR 295


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 49  RLVRYWFNNRR 17
           R V+ WF NRR
Sbjct: 177 RQVKVWFQNRR 187


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
          protein.
          Length = 96

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 49 RLVRYWFNNRRDNL 8
          R ++ WF NRR  L
Sbjct: 47 RQIKIWFQNRRMKL 60


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 49  RLVRYWFNNRRDNL 8
           R ++ WF NRR  L
Sbjct: 199 RQIKIWFQNRRMKL 212


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 49  RLVRYWFNNRRDNL 8
           R ++ WF NRR  L
Sbjct: 258 RQIKIWFQNRRMKL 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,881
Number of Sequences: 336
Number of extensions: 2808
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)